RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 NXF3Q9H4D5 531 aaKnown RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 C17orf75Q9HAS0 396 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 FAM50BQ9Y247 325 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 HES2Q9Y543 173 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 PCDHGC5Q9Y5F6 944 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 PHLPP2Q6ZVD8 1323 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 ZMYM2Q9UBW7 1377 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 NT5C1B-RDH14C9J2C7 533 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 ACKR2O00590 384 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 N4BP3O15049 544 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 LINC01565O15544 149 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 HIP1RO75146 1068 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 TBX10O75333 385 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 PRKCBP05771 671 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 GALTP07902 379 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 LIG1P18858 919 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 NDUFV1P49821 464 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 RESTQ13127 1097 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 DMP1Q13316 513 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 SMC1AQ14683 1233 aaKnown RBP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 DUSP6Q16828 381 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 TMEM119Q4V9L6 283 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 ZNF280BQ86YH2 543 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 HSCBQ8IWL3 235 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 CALML4Q96GE6 196 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 IGSF21Q96ID5 467 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 NECAB3Q96P71 396 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-213ENST00000482192 GAD1Q99259 594 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 PLIN2Q99541 437 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 ADPGKQ9BRR6 497 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 TMEM175Q9BSA9 504 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 APOL6Q9BWW8 343 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 PDZD7Q9H5P4 517 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 STK39Q9UEW8 545 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 MTMR6Q9Y217 621 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 GIT1Q9Y2X7 761 aa13.11□□□□□ -0.31
HMGN1-213ENST00000482192 K7ERI5 159 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 STX6O43752 255 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 B4GALT3O60512 393 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 DDHD2O94830 711 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 SRGAP2BP0DMP2 458 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 AKAP5P24588 427 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 NPTX2P47972 431 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 SLC11A1P49279 550 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 PEX3P56589 373 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
HMGN1-213ENST00000482192 DLX2Q07687 328 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-213ENST00000482192 TMC7Q7Z402 723 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-213ENST00000482192 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
HMGN1-213ENST00000482192 TMEM173Q86WV6 379 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-213ENST00000482192 DAW1Q8N136 415 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 RASSF8Q8NHQ8 419 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 ZFP42Q96MM3 310 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-213ENST00000482192 KMT5AQ9NQR1 393 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 KCNG1Q9UIX4 513 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 RBM19Q9Y4C8 960 aaKnown RBP13.1□□□□□ -0.31
HMGN1-213ENST00000482192 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
HMGN1-213ENST00000482192 PRUNE2Q8WUY3 3088 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 TTLL13PA6NNM8 815 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 HIDE1A8MVS5 230 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 PER2O15055 1255 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 NR1I2O75469 434 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 ALDH2P05091 517 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 HSP90AA1P07900 732 aaKnown RBP13.09□□□□□ -0.31
HMGN1-213ENST00000482192 PLA2G4BP0C869 781 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 IL9P15248 144 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 SCNN1GP51170 649 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 SLC12A3P55017 1021 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 GRIN1Q05586 938 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 DSC1Q08554 894 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 MAPK7Q13164 816 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 GIT2Q14161 759 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 PTPAQ15257 358 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 DCAF4L1Q3SXM0 396 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 ATF7IP2Q5U623 682 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 MRPL43Q8N983 215 aaKnown RBP13.09□□□□□ -0.31
HMGN1-213ENST00000482192 BCL7CQ8WUZ0 217 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-213ENST00000482192 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 CLEC1BQ9P126 229 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 ARHGAP28Q9P2N2 729 aa13.09□□□□□ -0.31
HMGN1-213ENST00000482192 PARP2Q9UGN5 583 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms