RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 TNFAIP2Q03169 654 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 RAPGEF1Q13905 1077 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 C1orf220Q5T0J3 134 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 C10orf76Q5T2E6 689 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 KRT39Q6A163 491 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 EFCAB12Q6NXP0 572 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 KIAA1328Q86T90 577 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 TRIM50Q86XT4 487 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-205ENST00000482013 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 LMO3Q8TAP4 145 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 APBA2Q99767 749 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 C16orf70Q9BSU1 422 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 MRPL4Q9BYD3 311 aaKnown RBP12.71□□□□□ -0.37
GGPS1-205ENST00000482013 CCDC113Q9H0I3 377 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 GPBP1L1Q9HC44 474 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-205ENST00000482013 TMEM8AQ9HCN3 771 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 SUCLA2Q9P2R7 463 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-205ENST00000482013 APEX2Q9UBZ4 518 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.37
GGPS1-205ENST00000482013 FHOD1Q9Y613 1164 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 KAT6AQ92794 2004 aa12.71□□□□□ -0.38
GGPS1-205ENST00000482013 EVPLQ92817 2033 aa12.71□□□□□ -0.38
GGPS1-205ENST00000482013 A0A0B4J269 797 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 A6NJR5 290 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 H3BRB1 525 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 ZC3H11AO75152 810 aaKnown RBP eCLIP12.7□□□□□ -0.38
GGPS1-205ENST00000482013 MMP3P08254 477 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 INSRRP14616 1297 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 TMOD1P28289 359 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 MXI1P50539 228 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 CDC42EP1Q00587 391 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 POU5F1Q01860 360 aaKnown RBP12.7□□□□□ -0.38
GGPS1-205ENST00000482013 PPP3CAQ08209 521 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 MKRN4PQ13434 485 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-205ENST00000482013 PSMD6Q15008 389 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 MAPK6Q16659 721 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 FAM187BQ17R55 369 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 TMEM63BQ5T3F8 832 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 IRF2BP2Q7Z5L9 587 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 CBWD2Q8IUF1 395 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 LINC01465Q8N7H1 131 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
GGPS1-205ENST00000482013 L2HGDHQ9H9P8 463 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 LZTFL1Q9NQ48 299 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 DNAJC12Q9UKB3 198 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 GJD2Q9UKL4 321 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-205ENST00000482013 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
GGPS1-205ENST00000482013 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
GGPS1-205ENST00000482013 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-205ENST00000482013 GOLGA8IPA6NC78 632 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 GOLGA8JA6NMD2 632 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
GGPS1-205ENST00000482013 KIF3CO14782 793 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 PJA2O43164 708 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 MSCO60682 206 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 TOM1L1O75674 476 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 ZNF865P0CJ78 1059 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-205ENST00000482013 KLRC1P26715 233 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 SOX5P35711 763 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 GPC3P51654 580 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 AP3M2P53677 418 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 PTENP60484 403 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 DLG4P78352 724 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 KIF5AQ12840 1032 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 GRM1Q13255 1194 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 SURF1Q15526 300 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 SLC18A3Q16572 532 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 TDRD12Q587J7 1177 aaKnown RBP12.69□□□□□ -0.38
GGPS1-205ENST00000482013 CCDC122Q5T0U0 273 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 IQCEQ6IPM2 695 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 VPS36Q86VN1 386 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 RNF149Q8NC42 400 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 PLEKHO2Q8TD55 490 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 IFIH1Q9BYX4 1025 aaKnown RBP12.69□□□□□ -0.38
GGPS1-205ENST00000482013 TMEM117Q9H0C3 514 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 FZD8Q9H461 694 aa12.69□□□□□ -0.38
GGPS1-205ENST00000482013 UQCRHLA0A096LP55 91 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 LRRIQ3A6PVS8 624 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-205ENST00000482013 ACKR2O00590 384 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 DYNC1I1O14576 645 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
GGPS1-205ENST00000482013 CLDN3O15551 220 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 PRKCBP05771 671 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 UQCRHP07919 91 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-205ENST00000482013 MAGEA1P43355 309 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 PHKA2P46019 1235 aa12.68□□□□□ -0.38
GGPS1-205ENST00000482013 GCLMP48507 274 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms