RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ARMC9Q7Z3E5 817 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 PALB2Q86YC2 1186 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 MAP4K3Q8IVH8 894 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 MMGT1Q8N4V1 131 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 TRAPPC12Q8WVT3 735 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 RUBCNQ92622 972 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 ATP6V0A4Q9HBG4 840 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 SCN4AP35499 1836 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 ZNFX1Q9P2E3 1918 aaKnown RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 TMCO5BA8MYB1 307 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 EVI5O60447 810 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 STAM2O75886 525 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 GJB1P08034 283 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 SMTNP53814 917 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 ERVK-9P63128 1117 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 MAP2K1Q02750 393 aaPredicted RBP15.67■□□□□ 0.1
CHD3-211ENST00000481999 DRAP1Q14919 205 aaPredicted RBP15.67■□□□□ 0.1
CHD3-211ENST00000481999 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 SLC9A9Q8IVB4 645 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 COG1Q8WTW3 980 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 ZBTB45Q96K62 511 aaPredicted RBP15.67■□□□□ 0.1
CHD3-211ENST00000481999 MMP19Q99542 508 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 HYOU1Q9Y4L1 999 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 F8VZ95 297 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 ATG7O95352 703 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 ZSCAN26Q16670 478 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 KIAA0753Q2KHM9 967 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 SCARA3Q6AZY7 606 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 CCNI2Q6ZMN8 369 aaPredicted RBP15.67■□□□□ 0.1
CHD3-211ENST00000481999 GOLGA5Q8TBA6 731 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 POMGNT1Q8WZA1 660 aa15.67■□□□□ 0.1
CHD3-211ENST00000481999 LRRIQ4A6NIV6 560 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 DLATP10515 647 aaKnown RBP15.66■□□□□ 0.1
CHD3-211ENST00000481999 GLRA2P23416 452 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 MRPS25P82663 173 aaKnown RBP15.66■□□□□ 0.1
CHD3-211ENST00000481999 C2orf54Q08AI8 447 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 KCTD2Q14681 263 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 ZBTB41Q5SVQ8 909 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 NFRKBQ6P4R8 1299 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 RNF10Q8N5U6 811 aaKnown RBP15.66■□□□□ 0.1
CHD3-211ENST00000481999 OLIG1Q8TAK6 271 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 SEMA4DQ92854 862 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 BICD1Q96G01 975 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 CEP89Q96ST8 783 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 OSBPL9Q96SU4 736 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 HAPLN2Q9GZV7 340 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 TMEM117Q9H0C3 514 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 LUC7LQ9NQ29 371 aaKnown RBP15.66■□□□□ 0.1
CHD3-211ENST00000481999 HPCAL4Q9UM19 191 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 LRRC37A2A6NM11 1700 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 CALCAP01258 141 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 KRT13P13646 458 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 LRRC71Q8N4P6 559 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 KIFAP3Q92845 792 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 NOX5Q96PH1 765 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 FAM213AQ9BRX8 229 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 ST6GALNAC4Q9H4F1 302 aa15.66■□□□□ 0.1
CHD3-211ENST00000481999 FOXN3O00409 490 aaPredicted RBP15.65■□□□□ 0.1
CHD3-211ENST00000481999 FTCDO95954 541 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 ACTN2P35609 894 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 STAT5BP51692 787 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 SNAPC2Q13487 334 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 PPP2R5AQ15172 486 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 INTS8Q75QN2 995 aaKnown RBP15.65■□□□□ 0.1
CHD3-211ENST00000481999 GLYCTKQ8IVS8 523 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 UBE2TQ9NPD8 197 aaPredicted RBP15.65■□□□□ 0.1
CHD3-211ENST00000481999 APEX2Q9UBZ4 518 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 TSKSQ9UJT2 592 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 DNAJC25-GNG10A0A024R161 153 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 A0A0U1RQG5 324 aaPredicted RBP15.65■□□□□ 0.1
CHD3-211ENST00000481999 GTPBP10A4D1E9 387 aaKnown RBP15.65■□□□□ 0.1
CHD3-211ENST00000481999 BTBD19C9JJ37 291 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 PDHXO00330 501 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 DDX3XO00571 662 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHD3-211ENST00000481999 ACOT2P49753 483 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 LEKR1Q6ZMV7 388 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 SPATA4Q8NEY3 305 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 GLG1Q92896 1179 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 MS4A4AQ96JQ5 239 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 NTPCRQ9BSD7 190 aaKnown RBP15.65■□□□□ 0.1
CHD3-211ENST00000481999 PI4K2AQ9BTU6 479 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 CWC15Q9P013 229 aaKnown RBP15.65■□□□□ 0.1
CHD3-211ENST00000481999 ARHGAP28Q9P2N2 729 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 NAGPAQ9UK23 515 aa15.65■□□□□ 0.1
CHD3-211ENST00000481999 IGKV6D-21A0A0A0MT36 114 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 PHACTR2O75167 634 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 ZMYND10O75800 440 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 HARSP12081 509 aaKnown RBP15.64■□□□□ 0.09
CHD3-211ENST00000481999 CAPN2P17655 700 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 CCDC181Q5TID7 509 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 FASTKD5Q7L8L6 764 aaKnown RBP15.64■□□□□ 0.09
CHD3-211ENST00000481999 MCPH1Q8NEM0 835 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 LNX1Q8TBB1 728 aaPredicted RBP15.64■□□□□ 0.09
CHD3-211ENST00000481999 PPP1R13LQ8WUF5 828 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 SLC20A1Q8WUM9 679 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 BRI3BPQ8WY22 251 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 SELENOOQ9BVL4 669 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
CHD3-211ENST00000481999 TAS2R14Q9NYV8 317 aa15.64■□□□□ 0.09
CHD3-211ENST00000481999 ANKFY1Q9P2R3 1169 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms