RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 RNF168Q8IYW5 571 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-224ENST00000481929 NELL1Q92832 810 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 NLRP4Q96MN2 994 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 PARD6AQ9NPB6 346 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 LTB4R2Q9NPC1 389 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 AGPAT5Q9NUQ2 364 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 SUCLA2Q9P2R7 463 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-224ENST00000481929 SEPT9Q9UHD8 586 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-224ENST00000481929 MTF2Q9Y483 593 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-224ENST00000481929 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 TGM5O43548 720 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 CHMP2AO43633 222 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 JAK3P52333 1124 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 PFKPQ01813 784 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 FUT2Q10981 343 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 COL9A3Q14050 684 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-224ENST00000481929 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 NETO1Q8TDF5 533 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDAC6-224ENST00000481929 CDH7Q9ULB5 785 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 RAB23Q9ULC3 237 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 FAM208BQ5VWN6 2430 aa16.79■□□□□ 0.28
HDAC6-224ENST00000481929 COL4A3Q01955 1670 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 IGKV6-21A0A0C4DH24 114 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 NCAM2O15394 837 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 ZMYND10O75800 440 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 SFNP31947 248 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 RTN1Q16799 776 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 XKR3Q5GH77 459 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 APOA5Q6Q788 366 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 COLGALT2Q8IYK4 626 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
HDAC6-224ENST00000481929 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
HDAC6-224ENST00000481929 NIFKQ9BYG3 293 aaKnown RBP16.78■□□□□ 0.28
HDAC6-224ENST00000481929 MTCL1Q9Y4B5 1905 aaKnown RBP16.77■□□□□ 0.28
HDAC6-224ENST00000481929 SLC30A4O14863 429 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 GAS7O60861 476 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 NR1I2O75469 434 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 EFEMP2O95967 443 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 CD72P21854 359 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 CIITAP33076 1130 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 CREMQ03060 361 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 TSSK4Q6SA08 328 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 GRASPQ7Z6J2 395 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-224ENST00000481929 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 LENG9Q96B70 501 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 NELL2Q99435 816 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 SH2D3AQ9BRG2 576 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 FAM126AQ9BYI3 521 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-224ENST00000481929 UBN1Q9NPG3 1134 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 PRMT8Q9NR22 394 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-224ENST00000481929 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 FNIP2Q9P278 1114 aa16.77■□□□□ 0.28
HDAC6-224ENST00000481929 ESYT2A0FGR8 921 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 TMEM150BA6NC51 233 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 ITGA4P13612 1032 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
HDAC6-224ENST00000481929 TARSP26639 723 aaKnown RBP16.76■□□□□ 0.27
HDAC6-224ENST00000481929 RPS9P46781 194 aaKnown RBP16.76■□□□□ 0.27
HDAC6-224ENST00000481929 SPEM2Q0P670 501 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 LILRA6Q6PI73 481 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 TPRG1Q6ZUI0 275 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 CNNM3Q8NE01 707 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 CLDN23Q96B33 292 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 B3GALT6Q96L58 329 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 RIT2Q99578 217 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 JPH2Q9BR39 696 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-224ENST00000481929 TEKT3Q9BXF9 490 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 UNC45AQ9H3U1 944 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 C6orf50Q9HD87 102 aa16.76■□□□□ 0.27
HDAC6-224ENST00000481929 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.76■□□□□ 0.27
HDAC6-224ENST00000481929 SLC27A2O14975 620 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 MSH4O15457 936 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 ZBTB43O43298 467 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 MAFO75444 373 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-224ENST00000481929 NTHL1P78549 312 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 DSC1Q08554 894 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 DMWDQ09019 674 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 USP41Q3LFD5 358 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 UBXN11Q5T124 520 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 LRCH2Q5VUJ6 765 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 LAIR1Q6GTX8 287 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 MIER3Q7Z3K6 550 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 RDM1Q8NG50 284 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 FGF13Q92913 245 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 MBOAT7Q96N66 472 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 PHF20Q9BVI0 1012 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 COLEC11Q9BWP8 271 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 ZMYND12Q9H0C1 365 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
HDAC6-224ENST00000481929 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-224ENST00000481929 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
HDAC6-224ENST00000481929 CNOT1A5YKK6 2376 aaKnown RBP16.74■□□□□ 0.27
HDAC6-224ENST00000481929 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-224ENST00000481929 GOLGA8AA7E2F4 631 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms