RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 OFD1O75665 1012 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 PRKCBP05771 671 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 PRCPP42785 496 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 NLRP12P59046 1061 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 NCBP1Q09161 790 aaKnown RBP12.7□□□□□ -0.38
HPS4-212ENST00000481910 NFX1Q12986 1120 aaKnown RBP12.7□□□□□ -0.38
HPS4-212ENST00000481910 LPIN1Q14693 890 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 CATSPER4Q7RTX7 472 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 NELFCDQ8IXH7 590 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 SDR16C5Q8N3Y7 309 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 MNS1Q8NEH6 495 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 KCNN1Q92952 543 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 HVCN1Q96D96 273 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 ACCSQ96QU6 501 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 PAIP2Q9BPZ3 127 aaKnown RBP12.7□□□□□ -0.38
HPS4-212ENST00000481910 TRAIPQ9BWF2 469 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 OSBPL7Q9BZF2 842 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 WNT8AQ9H1J5 351 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 TMEM206Q9H813 350 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
HPS4-212ENST00000481910 SQORQ9Y6N5 450 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 RBAK-RBAKDNI3L0D1 243 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 TULP2O00295 520 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 ACKR2O00590 384 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 PARNO95453 639 aaKnown RBP12.69□□□□□ -0.38
HPS4-212ENST00000481910 ITGB8P26012 769 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
HPS4-212ENST00000481910 STIM1Q13586 685 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 MBTPS1Q14703 1052 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 PCBP1Q15365 356 aaKnown RBP eCLIP12.69□□□□□ -0.38
HPS4-212ENST00000481910 FAM187BQ17R55 369 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
HPS4-212ENST00000481910 BICD1Q96G01 975 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 PRIMPOLQ96LW4 560 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 AGO3Q9H9G7 860 aaKnown RBP12.69□□□□□ -0.38
HPS4-212ENST00000481910 ST3GAL5Q9UNP4 418 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 USP20Q9Y2K6 914 aa12.69□□□□□ -0.38
HPS4-212ENST00000481910 B4GALT5O43286 388 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 NBNO60934 754 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 CD52P31358 61 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 PAK2Q13177 524 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 KNOP1Q1ED39 458 aaKnown RBP12.68□□□□□ -0.38
HPS4-212ENST00000481910 DPCR1Q3MIW9 517 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 FAM228AQ86W67 206 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 MAP4K3Q8IVH8 894 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 ADSSL1Q8N142 457 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 MLKLQ8NB16 471 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
HPS4-212ENST00000481910 IFIH1Q9BYX4 1025 aaKnown RBP12.68□□□□□ -0.38
HPS4-212ENST00000481910 PADI3Q9ULW8 664 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 SCN5AQ14524 2016 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 TTLL13PA6NNM8 815 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 PPP1R3GB7ZBB8 358 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 HNRNPDLO14979 420 aaKnown RBP12.68□□□□□ -0.38
HPS4-212ENST00000481910 TSPAN1O60635 241 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 EDN1P05305 212 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 CCDC192P0DO97 292 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
HPS4-212ENST00000481910 HOXD13P35453 343 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 PPP1R2P41236 205 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 TYRO3Q06418 890 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 GPNMBQ14956 572 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 STX1AQ16623 288 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 AMHR2Q16671 573 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 COBLL1Q53SF7 1204 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 KLHL10Q6JEL2 608 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 MFSD5Q6N075 450 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 DEFB128Q7Z7B8 93 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 TMEM199Q8N511 208 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 CPB2Q96IY4 423 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 TARS2Q9BW92 718 aaKnown RBP12.68□□□□□ -0.38
HPS4-212ENST00000481910 ANO10Q9NW15 660 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 UBE4BO95155 1302 aa12.68□□□□□ -0.38
HPS4-212ENST00000481910 MKI67P46013 3256 aaKnown RBP12.67□□□□□ -0.38
HPS4-212ENST00000481910 PSMA7O14818 248 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 CSF2RAP15509 400 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 SYN1P17600 705 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 ARF4P18085 180 aaPredicted RBP12.67□□□□□ -0.38
HPS4-212ENST00000481910 LIG4P49917 911 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 ATF7IP2Q5U623 682 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 DHTKD1Q96HY7 919 aaPredicted RBP12.67□□□□□ -0.38
HPS4-212ENST00000481910 ACO2Q99798 780 aaKnown RBP12.67□□□□□ -0.38
HPS4-212ENST00000481910 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 AGPAT5Q9NUQ2 364 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
HPS4-212ENST00000481910 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 PIN4Q9Y237 131 aaKnown RBP12.67□□□□□ -0.38
HPS4-212ENST00000481910 TANC1Q9C0D5 1861 aa12.67□□□□□ -0.38
HPS4-212ENST00000481910 CNTNAP2Q9UHC6 1331 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 AXLP30530 894 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 HOXA11P31270 313 aaPredicted RBP12.66□□□□□ -0.38
HPS4-212ENST00000481910 RFC2P35250 354 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 ZPBP2Q6X784 338 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms