RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 GAS7O60861 476 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 CSDE1O75534 798 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 GALTP07902 379 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 SPATA31D3P0C874 917 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 TARSP26639 723 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 SLC11A1P49279 550 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 AKAP17AQ02040 695 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 DRP2Q13474 957 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 NTRK3Q16288 839 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 LAIR1Q6GTX8 287 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 PARM1Q6UWI2 310 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 SPATA31D4Q6ZUB0 917 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 CCDC148Q8NFR7 591 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 SLC5A5Q92911 643 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 FGF14Q92915 247 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 LPPQ93052 612 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 CCDC136Q96JN2 1154 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 RIT2Q99578 217 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 UNC45AQ9H3U1 944 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 NRDE2Q9H7Z3 1164 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 LTB4R2Q9NPC1 389 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 PRMT8Q9NR22 394 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 NRBP2Q9NSY0 501 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 TBC1D13Q9NVG8 400 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 VPS54Q9P1Q0 977 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 RAB23Q9ULC3 237 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 INPP5FQ9Y2H2 1132 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 IGF2RP11717 2491 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 MIA3Q5JRA6 1907 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 TMEM150BA6NC51 233 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 SOBPA7XYQ1 873 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 MEIS3P2A8K0S8 358 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 LILRB3O75022 631 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 ZIC2O95409 532 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 IFNAR1P17181 557 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 JAK3P52333 1124 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 MTAPQ13126 283 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 TARBP2Q15633 366 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 SLC44A4Q53GD3 710 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 LRCH2Q5VUJ6 765 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 BLOC1S2Q6QNY1 142 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 UNQ6494/PRO21346Q6UXR6 183 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 CENPQQ7L2Z9 268 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 FBXL16Q8N461 479 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 SLC26A6Q9BXS9 759 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 RNF26Q9BY78 433 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 NCOA5Q9HCD5 579 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 SNX14Q9Y5W7 946 aa10.59□□□□□ -0.71
SMARCE1-210ENST00000481231 TEX28O15482 410 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 PSMD10O75832 226 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 STBD1O95210 358 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 GLUD1P00367 558 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 RETP07949 1114 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 TDGF1P13385 188 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 SFNP31947 248 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 HSPA4P34932 840 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 USP11P51784 963 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 AK2P54819 239 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 CCT2P78371 535 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 RNASELQ05823 741 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 ZBTB41Q5SVQ8 909 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 IL31Q6EBC2 164 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 ZNF280BQ86YH2 543 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 TBCKQ8TEA7 893 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 CEP89Q96ST8 783 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 TEKT3Q9BXF9 490 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 GCOM2Q9BZD3 368 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 OSBPL6Q9BZF3 934 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 MRPL17Q9NRX2 175 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 DACT1Q9NYF0 836 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 WDFY3Q8IZQ1 3526 aa10.58□□□□□ -0.72
SMARCE1-210ENST00000481231 DOCK8Q8NF50 2099 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 IGKV6-21A0A0C4DH24 114 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 TDP2O95551 362 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 PDIA3P30101 505 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 MAGEA9P43362 315 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 PHKA2P46019 1235 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 NLRP5P59047 1200 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 PRKCQQ04759 706 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 CSRP2Q16527 193 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 MTERF2Q49AM1 385 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 Q4G0T1 1027 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 XKR3Q5GH77 459 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 NOMO2Q5JPE7 1267 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 B3GNT9Q6UX72 402 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 TPRG1Q6ZUI0 275 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 MIER3Q7Z3K6 550 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 RDM1Q8NG50 284 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 DDX1Q92499 740 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 CLDN23Q96B33 292 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 KXD1Q9BQD3 176 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 SH2D3AQ9BRG2 576 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 TRAIPQ9BWF2 469 aa10.57□□□□□ -0.72
SMARCE1-210ENST00000481231 NIFKQ9BYG3 293 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms