RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 VWA7Q9Y334 891 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 PCDHB1Q9Y5F3 818 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 PCDHA13Q9Y5I0 950 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 RPTORQ8N122 1335 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 AKR1B10O60218 316 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 PRAMEF4O60810 478 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 TUSC2O75896 110 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 TRIM27P14373 513 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 CFPP27918 469 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 ADSLP30566 484 aaPredicted RBP6.66□□□□□ -1.34
UPF3A-207ENST00000481131 MRE11P49959 708 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 MST1LQ2TV78 715 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 TAS1R1Q7RTX1 841 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 REXO1L1PQ8IX06 675 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 CCAR1Q8IX12 1150 aaKnown RBP6.66□□□□□ -1.34
UPF3A-207ENST00000481131 RTKN2Q8IZC4 609 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 TXNDC5Q8NBS9 432 aaKnown RBP6.66□□□□□ -1.34
UPF3A-207ENST00000481131 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.66□□□□□ -1.34
UPF3A-207ENST00000481131 SNX33Q8WV41 574 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 MBD6Q96DN6 1003 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 FAM193BQ96PV7 902 aaPredicted RBP6.66□□□□□ -1.34
UPF3A-207ENST00000481131 LRFN3Q9BTN0 628 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 SARGQ9BW04 601 aa6.66□□□□□ -1.34
UPF3A-207ENST00000481131 CTDP1Q9Y5B0 961 aaPredicted RBP6.66□□□□□ -1.34
UPF3A-207ENST00000481131 WIZO95785 1651 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 H3BML4 177 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 DTNBO60941 627 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 TSPAN15O95858 294 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 SARSP49591 514 aaKnown RBP6.65□□□□□ -1.34
UPF3A-207ENST00000481131 RRADP55042 308 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 RHBDL3P58872 404 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
UPF3A-207ENST00000481131 UBE4AQ14139 1066 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 PKN1Q16512 942 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 C19orf54Q5BKX5 351 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 MCTP2Q6DN12 878 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 GPR155Q7Z3F1 870 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 DENND1CQ8IV53 801 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 CARFQ8N187 725 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 LILRA3Q8N6C8 439 aaPredicted RBP6.65□□□□□ -1.34
UPF3A-207ENST00000481131 TP53I13Q8NBR0 393 aaPredicted RBP6.65□□□□□ -1.34
UPF3A-207ENST00000481131 BHLHE22Q8NFJ8 381 aaPredicted RBP6.65□□□□□ -1.34
UPF3A-207ENST00000481131 RAB24Q969Q5 203 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 GFM2Q969S9 779 aaKnown RBP6.65□□□□□ -1.34
UPF3A-207ENST00000481131 DDX21Q9NR30 783 aaKnown RBP eCLIP6.65□□□□□ -1.34
UPF3A-207ENST00000481131 ADAM29Q9UKF5 820 aa6.65□□□□□ -1.34
UPF3A-207ENST00000481131 TCAF2A6NFQ2 919 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 FAM171A2A8MVW0 826 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 B3GALT2O43825 422 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 PEX14O75381 377 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 UBXN7O94888 489 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 RAP1GAPP47736 663 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 SESN2P58004 480 aaPredicted RBP6.64□□□□□ -1.35
UPF3A-207ENST00000481131 LLGL1Q15334 1064 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 TBR1Q16650 682 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 SYCP2LQ5T4T6 812 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 MIGA2Q7L4E1 593 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 ZDHHC14Q8IZN3 488 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 CAMKK1Q8N5S9 505 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 NSUN6Q8TEA1 469 aaKnown RBP6.64□□□□□ -1.35
UPF3A-207ENST00000481131 UIMC1Q96RL1 719 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 DMRTA2Q96SC8 542 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 C7orf25Q9BPX7 421 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 CARD11Q9BXL7 1154 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 TMEM168Q9H0V1 697 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 TLR9Q9NR96 1032 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 ING3Q9NXR8 418 aa6.64□□□□□ -1.35
UPF3A-207ENST00000481131 CFAP20Q9Y6A4 193 aaKnown RBP6.64□□□□□ -1.35
UPF3A-207ENST00000481131 LRRC14BA6NHZ5 514 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 WNT10BO00744 389 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 APAF1O14727 1248 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 TPP1O14773 563 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 DAPK3O43293 454 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 ADCY6O43306 1168 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 ALDH1A2O94788 518 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 RHCEP18577 417 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 MEOX1P50221 254 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 MAP2K6P52564 334 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 LINC00310P59036 64 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 RHDQ02161 417 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 TARDBPQ13148 414 aaKnown RBP eCLIP6.63□□□□□ -1.35
UPF3A-207ENST00000481131 USP10Q14694 798 aaKnown RBP6.63□□□□□ -1.35
UPF3A-207ENST00000481131 ACAP1Q15027 740 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 AGBL4Q5VU57 503 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 LCNL1Q6ZST4 164 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 RHOT1Q8IXI2 618 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 PLA2G15Q8NCC3 412 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 PJA1Q8NG27 643 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 ADAMTS17Q8TE56 1095 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 CGRRF1Q99675 332 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 PDCD2LQ9BRP1 358 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 PCGF6Q9BYE7 350 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 TMEM60Q9H2L4 133 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 MAN1C1Q9NR34 630 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.63□□□□□ -1.35
UPF3A-207ENST00000481131 TRPS1Q9UHF7 1281 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 FAM184BQ9ULE4 1060 aa6.63□□□□□ -1.35
UPF3A-207ENST00000481131 RBM8AQ9Y5S9 174 aaKnown RBP6.63□□□□□ -1.35
UPF3A-207ENST00000481131 ATAD2BQ9ULI0 1458 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms