RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TJP2Q9UDY2 1190 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 SEPT3Q9UH03 358 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 TRPC1P48995 793 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 PPHLN1Q8NEY8 458 aaKnown RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 DEAF1O75398 565 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 CUL4AQ13619 759 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF235Q14590 738 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 GOLPH3LQ9H4A5 285 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 POLE3Q9NRF9 147 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 ABCF3Q9NUQ8 709 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 SPTLC3Q9NUV7 552 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 TRAF3IP3Q9Y228 551 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 SLC1A1P43005 524 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 PSMC1P62191 440 aaKnown RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 APLFQ8IW19 511 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 SRPK1Q96SB4 655 aaKnown RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 MAGED2Q9UNF1 606 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 USP17L8P0C7I0 530 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 RASGRP4Q8TDF6 673 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 FOXP3Q9BZS1 431 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 PALMDQ9NP74 551 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 HEY1Q9Y5J3 304 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 APC2O95996 2303 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 A2ML1A8K2U0 1454 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 ANGPT2O15123 496 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 CNGA3Q16281 694 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 TRIM69Q86WT6 500 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 NSUN6Q8TEA1 469 aaKnown RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 DNAJC12Q9UKB3 198 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 G3BP2Q9UN86 482 aaKnown RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 M0QYV0 167 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 ZSCAN9O15535 394 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 MARK3P27448 753 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 BCAR1P56945 870 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 HIF1AQ16665 826 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 CIAPIN1Q6FI81 312 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 SARM1Q6SZW1 724 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 RHOT1Q8IXI2 618 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 SFMBT1Q9UHJ3 866 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 PVALEFA0A1B0GWK0 134 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 GMNCA6NCL1 334 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 MYL3P08590 195 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 CDK8P49336 464 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 CTTNQ14247 550 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 FASTKD1Q53R41 847 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 MFSD14CQ5VZR4 134 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 PRUNE1Q86TP1 453 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 STXBP3O00186 592 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 NLRP11P59045 1033 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 POTEAQ6S8J7 498 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SCN4BQ8IWT1 228 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 WWP1Q9H0M0 922 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 TBC1D4O60343 1298 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 S100A5P33763 92 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SLC16A2P36021 539 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SLC9A2Q9UBY0 812 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 PYCARDQ9ULZ3 195 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 PRR23D1E9PI22 279 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 TRAPPC3O43617 180 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 PRR23D2P0DMB1 279 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF302Q9NR11 478 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 TGS1Q96RS0 853 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 UGGT1Q9NYU2 1555 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 DHX34Q14147 1143 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 CENPPQ6IPU0 288 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 OR6P1Q8NGX9 317 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 VPS11Q9H270 941 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 BHMT2Q9H2M3 363 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 VPS9D1Q9Y2B5 631 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 ARHGEF40Q8TER5 1519 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SPDYE7PQ495Y7 208 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 AARS2Q5JTZ9 985 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SLC27A3Q5K4L6 730 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SEC31AO94979 1220 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 KCNQ4P56696 695 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 RGS9BPQ6ZS82 235 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 CEP95Q96GE4 821 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 MAD2L2Q9UI95 211 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 SLC16A3O15427 465 aaKnown RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 BNIP3LO60238 219 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 RALBP11234 206 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 GRAPQ13588 217 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 DUOXA2Q1HG44 320 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 GRAPLQ8TC17 118 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-212ENST00000480614 ABHD10Q9NUJ1 306 aa10.09□□□□□ -0.79
VEGFA-212ENST00000480614 CLRN2A0PK11 232 aa10.08□□□□□ -0.8
VEGFA-212ENST00000480614 LRRIQ3A6PVS8 624 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-212ENST00000480614 DAB1O75553 588 aa10.08□□□□□ -0.8
VEGFA-212ENST00000480614 USP17L2Q6R6M4 530 aa10.08□□□□□ -0.8
VEGFA-212ENST00000480614 EEF2KMTQ96G04 330 aa10.08□□□□□ -0.8
VEGFA-212ENST00000480614 HEG1Q9ULI3 1381 aa10.08□□□□□ -0.8
VEGFA-212ENST00000480614 EIF2AK2P19525 551 aaKnown RBP10.08□□□□□ -0.8
VEGFA-212ENST00000480614 KNOP1Q1ED39 458 aaKnown RBP10.08□□□□□ -0.8
VEGFA-212ENST00000480614 PLD3Q8IV08 490 aa10.08□□□□□ -0.8
VEGFA-212ENST00000480614 HIPK4Q8NE63 616 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms