RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 Q7L0L9 218 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 SMG8Q8ND04 991 aaKnown RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 CNNM3Q8NE01 707 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 HELQQ8TDG4 1101 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 HPS3Q969F9 1004 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 ZNF689Q96CS4 500 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 BICD1Q96G01 975 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 PAGE5Q96GU1 130 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 FAM161BQ96MY7 647 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 C7orf25Q9BPX7 421 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 TARS2Q9BW92 718 aaKnown RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 TRAIPQ9BWF2 469 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 APOL6Q9BWW8 343 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 MRPL4Q9BYD3 311 aaKnown RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 FGFBP2Q9BYJ0 223 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 TTYH1Q9H313 450 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 MRPL44Q9H9J2 332 aaKnown RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 SLC28A3Q9HAS3 691 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 HCSTQ9UBK5 93 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 SEL1LQ9UBV2 794 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 HES2Q9Y543 173 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 IPPQ9Y573 584 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 LINC01553A4QN01 128 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 SKIP12755 728 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 TAP1Q03518 808 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 FAM160A1Q05DH4 1040 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 BTG3Q14201 252 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-213ENST00000480539 ZNF568Q3ZCX4 644 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 KRBA2Q6ZNG9 492 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 FMR1NBQ8N0W7 255 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-213ENST00000480539 ACO2Q99798 780 aaKnown RBP16.63■□□□□ 0.25
ABCF3-213ENST00000480539 CERS4Q9HA82 394 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-213ENST00000480539 ANKFY1Q9P2R3 1169 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 KCNG1Q9UIX4 513 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
ABCF3-213ENST00000480539 COL4A4P53420 1690 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-213ENST00000480539 KIAA1671Q9BY89 1806 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
ABCF3-213ENST00000480539 GCNT3O95395 438 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 MYBP10242 640 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 HARSP12081 509 aaKnown RBP16.62■□□□□ 0.25
ABCF3-213ENST00000480539 CASP5P51878 434 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 CNNM4Q6P4Q7 775 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 CMTR2Q8IYT2 770 aaKnown RBP16.62■□□□□ 0.25
ABCF3-213ENST00000480539 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 FIBCD1Q8N539 461 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 GLIS3Q8NEA6 775 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 ADPGKQ9BRR6 497 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 ZNF576Q9H609 170 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 OLFML3Q9NRN5 406 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 TBX20Q9UMR3 447 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 TNFSF13BQ9Y275 285 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
ABCF3-213ENST00000480539 MRPL42Q9Y6G3 142 aaKnown RBP16.62■□□□□ 0.25
ABCF3-213ENST00000480539 FNDC1Q4ZHG4 1894 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-213ENST00000480539 TMEM265A0A087WTH1 108 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 HOXA2O43364 376 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 NR1I2O75469 434 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 EOMESO95936 686 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 ITGA4P13612 1032 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
ABCF3-213ENST00000480539 DCAF4L1Q3SXM0 396 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 FAM26FQ5R3K3 315 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 AGMOQ6ZNB7 445 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 MRPL10Q7Z7H8 261 aaKnown RBP16.61■□□□□ 0.25
ABCF3-213ENST00000480539 ZBTB33Q86T24 672 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 SLC17A8Q8NDX2 589 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 PGBD4Q96DM1 585 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 CASD1Q96PB1 797 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 TMEM117Q9H0C3 514 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 CDT1Q9H211 546 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 IKZF4Q9H2S9 585 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 RSAD1Q9HA92 442 aa16.61■□□□□ 0.25
ABCF3-213ENST00000480539 CHD9Q3L8U1 2897 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 ABLIM1O14639 778 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 GTPBP6O43824 516 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-213ENST00000480539 KLRC4O43908 158 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 ZNF623O75123 536 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
ABCF3-213ENST00000480539 PPP1R37O75864 691 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 AKAP5P24588 427 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 MLH1P40692 756 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 LIG4P49917 911 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 GTF2BQ00403 316 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.25
ABCF3-213ENST00000480539 L1TD1Q5T7N2 865 aaKnown RBP16.6■□□□□ 0.25
ABCF3-213ENST00000480539 MPZL3Q6UWV2 235 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 ZNF720Q7Z2F6 126 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 DEFB123Q8N688 67 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 CEP120Q8N960 986 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 ARNTL2Q8WYA1 636 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms