RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 GTF3C6Q969F1 213 aa23.11■■□□□ 1.29
CLIC3-202ENST00000480181 VN1R3Q9BXE9 311 aa23.11■■□□□ 1.29
CLIC3-202ENST00000480181 FBXL21Q9UKT6 434 aa23.11■■□□□ 1.29
CLIC3-202ENST00000480181 VAV3Q9UKW4 847 aa23.11■■□□□ 1.29
CLIC3-202ENST00000480181 DUSP12Q9UNI6 340 aa23.11■■□□□ 1.29
CLIC3-202ENST00000480181 EML1O00423 815 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 SLC37A4O43826 429 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 BAG4O95429 457 aaKnown RBP23.1■■□□□ 1.29
CLIC3-202ENST00000480181 AOC1P19801 751 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 HOXA11P31270 313 aaPredicted RBP23.1■■□□□ 1.29
CLIC3-202ENST00000480181 YWHABP31946 246 aaKnown RBP23.1■■□□□ 1.29
CLIC3-202ENST00000480181 NOTUMQ6P988 496 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 HDAC7Q8WUI4 952 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 NKD2Q969F2 451 aaPredicted RBP23.1■■□□□ 1.29
CLIC3-202ENST00000480181 NXPE3Q969Y0 559 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 TMEM143Q96AN5 459 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 RPS6KC1Q96S38 1066 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 HERC2P3Q9BVR0 1158 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 SMOC2Q9H3U7 446 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 ZSWIM4Q9H7M6 989 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 KCNK12Q9HB15 430 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 MYO15AQ9UKN7 3530 aa23.1■■□□□ 1.29
CLIC3-202ENST00000480181 DENND4AQ7Z401 1863 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 PRR23AA6NEV1 266 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 POMCP01189 267 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 TFDP1Q14186 410 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 NPY5RQ15761 445 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 FERMT3Q86UX7 667 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 SLFN12Q8IYM2 578 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 NECAB1Q8N987 351 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 RNF149Q8NC42 400 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 LXNQ9BS40 222 aa23.09■■□□□ 1.29
CLIC3-202ENST00000480181 PTPRZ1P23471 2315 aaPredicted RBP23.09■■□□□ 1.29
CLIC3-202ENST00000480181 STK36Q9NRP7 1315 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 INPPL1O15357 1258 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 CCNT1O60563 726 aaKnown RBP23.08■■□□□ 1.29
CLIC3-202ENST00000480181 GLUD1P00367 558 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 OR1G1P47890 313 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 POU5F1BQ06416 359 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 EMC2Q15006 297 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 RABEP1Q15276 862 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 UBXN11Q5T124 520 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 MTRQ99707 1265 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 PHF20Q9BVI0 1012 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 MINDY3Q9H8M7 445 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 MAN1C1Q9NR34 630 aa23.08■■□□□ 1.29
CLIC3-202ENST00000480181 PLXNA3P51805 1871 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 B4GALT3O60512 393 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 GLUD2P49448 558 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 XKR9Q5GH70 373 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 ASCL5Q7RTU5 278 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 COLGALT2Q8IYK4 626 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 GPR65Q8IYL9 337 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 COLEC11Q9BWP8 271 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 PLEKHA4Q9H4M7 779 aa23.07■■□□□ 1.28
CLIC3-202ENST00000480181 UPF2Q9HAU5 1272 aaKnown RBP23.07■■□□□ 1.28
CLIC3-202ENST00000480181 WDR6Q9NNW5 1121 aaKnown RBP23.07■■□□□ 1.28
CLIC3-202ENST00000480181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.07■■□□□ 1.28
CLIC3-202ENST00000480181 CCDC195A0A1B0GUA6 201 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 C2CD2LO14523 706 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 DTNBO60941 627 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 FDPSP14324 419 aaKnown RBP23.06■■□□□ 1.28
CLIC3-202ENST00000480181 CREMQ03060 361 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 CWF19L1Q69YN2 538 aaKnown RBP23.06■■□□□ 1.28
CLIC3-202ENST00000480181 CCDC105Q8IYK2 499 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 NSUN7Q8NE18 718 aaKnown RBP23.06■■□□□ 1.28
CLIC3-202ENST00000480181 AIFM3Q96NN9 605 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 TRIM6Q9C030 488 aaPredicted RBP23.06■■□□□ 1.28
CLIC3-202ENST00000480181 RXFP1Q9HBX9 757 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 WNT16Q9UBV4 365 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 KCNJ14Q9UNX9 436 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 LIMCH1Q9UPQ0 1083 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 GIT1Q9Y2X7 761 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 PRG3Q9Y2Y8 225 aaPredicted RBP23.06■■□□□ 1.28
CLIC3-202ENST00000480181 IPPQ9Y573 584 aa23.06■■□□□ 1.28
CLIC3-202ENST00000480181 ARL5CA6NH57 179 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 RFX1P22670 979 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 GBP2P32456 591 aaPredicted RBP23.05■■□□□ 1.28
CLIC3-202ENST00000480181 AFF1P51825 1210 aaKnown RBP23.05■■□□□ 1.28
CLIC3-202ENST00000480181 PTENP60484 403 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 KIAA0319Q5VV43 1072 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 NCAPH2Q6IBW4 605 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 SIX5Q8N196 739 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 ZNF579Q8NAF0 562 aaKnown RBP23.05■■□□□ 1.28
CLIC3-202ENST00000480181 SMG8Q8ND04 991 aaKnown RBP23.05■■□□□ 1.28
CLIC3-202ENST00000480181 WASF1Q92558 559 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 CSRNP2Q9H175 543 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 EPS15L1Q9UBC2 864 aa23.05■■□□□ 1.28
CLIC3-202ENST00000480181 RIF1Q5UIP0 2472 aaKnown RBP23.04■■□□□ 1.28
CLIC3-202ENST00000480181 TEX28O15482 410 aa23.04■■□□□ 1.28
CLIC3-202ENST00000480181 CD2BP2O95400 341 aaKnown RBP23.04■■□□□ 1.28
CLIC3-202ENST00000480181 DSG1Q02413 1049 aa23.04■■□□□ 1.28
CLIC3-202ENST00000480181 DSC1Q08554 894 aa23.04■■□□□ 1.28
CLIC3-202ENST00000480181 FRMD5Q7Z6J6 570 aa23.04■■□□□ 1.28
CLIC3-202ENST00000480181 IFNLR1Q8IU57 520 aaPredicted RBP23.04■■□□□ 1.28
CLIC3-202ENST00000480181 DTWD2Q8NBA8 298 aa23.04■■□□□ 1.28
CLIC3-202ENST00000480181 HAS1Q92839 578 aa23.04■■□□□ 1.28
CLIC3-202ENST00000480181 CCDC43Q96MW1 224 aaKnown RBP23.04■■□□□ 1.28
CLIC3-202ENST00000480181 GAD1Q99259 594 aa23.04■■□□□ 1.28
CLIC3-202ENST00000480181 SEMA4AQ9H3S1 761 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms