RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 RNF169Q8NCN4 708 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ACTRT1Q8TDG2 376 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ABTB1Q969K4 478 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 CEP19Q96LK0 163 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 MMADHCQ9H3L0 296 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ECT2Q9H8V3 914 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 NCKAP5LQ9HCH0 1330 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 OATP04181 439 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 UCHL3P15374 230 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 DNAJB2P25686 324 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 SERPINB3P29508 390 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 QARSP47897 775 aaKnown RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 USH1GQ495M9 461 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 CEP55Q53EZ4 464 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC44A4Q53GD3 710 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 OR6B2Q6IFH4 312 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 TRIM67Q6ZTA4 783 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 SFR1Q86XK3 245 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 EPC1Q9H2F5 836 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 TRIM45Q9H8W5 580 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 GPBP1L1Q9HC44 474 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 CHCHD3Q9NX63 227 aaKnown RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 MPP6Q9NZW5 540 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 PAK5Q9P286 719 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 POTEFA5A3E0 1075 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 FSBPO95073 299 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 HNRNPCP07910 306 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 POTEIP0CG38 1075 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 HSPA1AP0DMV8 641 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 HSPA1BP0DMV9 641 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CYP2C8P10632 490 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 NCF2P19878 526 aaPredicted RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PRELPP51888 382 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GRM1Q13255 1194 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 MTFR1Q15390 333 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 POTEEQ6S8J3 1075 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 C16orf89Q6UX73 402 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 TRIM69Q86WT6 500 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CCNYQ8ND76 341 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 AGPAT1Q99943 283 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 NOD2Q9HC29 1040 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC40A1Q9NP59 571 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 DCP1AQ9NPI6 582 aaPredicted RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 ZFATQ9P243 1243 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 TBK1Q9UHD2 729 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CSADQ9Y600 493 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 NLRP1Q9C000 1473 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 DAB1O75553 588 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 HOXB8P17481 243 aaPredicted RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PSMA2P25787 234 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GUCY1A3Q02108 690 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 TMED1Q13445 227 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 KYNUQ16719 465 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 TXNRD1Q16881 649 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PROSER3Q2NL68 480 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 WLSQ5T9L3 541 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CDKAL1Q5VV42 579 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PADI6Q6TGC4 694 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 SIX6OS1Q8N1H7 587 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 TTC8Q8TAM2 541 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 RIT2Q99578 217 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PHF20Q9BVI0 1012 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PARVAQ9NVD7 372 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 STX18Q9P2W9 335 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CTNNAL1Q9UBT7 734 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 AMACRQ9UHK6 382 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 ACTL7BQ9Y614 415 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GOLGA8SH3BPF8 625 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 M0R2C6 588 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 RGL2O15211 777 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GSTA4O15217 222 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 HOXB6P17509 224 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GALCP54803 685 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 DNAJC3Q13217 504 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 STX3Q13277 289 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 C16orf87Q6PH81 154 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 LRRC6Q86X45 466 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GLYCTKQ8IVS8 523 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 MREGQ8N565 214 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF398Q8TD17 642 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 ATXN2LQ8WWM7 1075 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 TSPAN17Q96FV3 270 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 AIFM3Q96NN9 605 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PIH1D3Q9NQM4 214 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CPSF3Q9UKF6 684 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 FAM237AA0A1B0GTK4 181 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PSMC5P62195 406 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PURAQ00577 322 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GABPAQ06546 454 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 MAPK7Q13164 816 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PIGHQ14442 188 aaPredicted RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 EFTUD2Q15029 972 aaKnown RBP eCLIP6.51□□□□□ -1.371e-6■□□□□ 8.7
PRPF4B-205ENST00000480058 CAPN12Q6ZSI9 719 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CALML6Q8TD86 181 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 FAF2Q96CS3 445 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CEP95Q96GE4 821 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms