RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 ZPBP2Q6X784 338 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
APTX-223ENST00000479656 LRRC8AQ8IWT6 810 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 GPD1LQ8N335 351 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 SLC35C1Q96A29 364 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ERGIC2Q96RQ1 377 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ACO2Q99798 780 aaKnown RBP12.23□□□□□ -0.45
APTX-223ENST00000479656 FAM213AQ9BRX8 229 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ADAMTS10Q9H324 1103 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 CDHR5Q9HBB8 845 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 GTF2IRD1Q9UHL9 959 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.45
APTX-223ENST00000479656 GRIN2DO15399 1336 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 CLDN3O15551 220 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 B4GALT5O43286 388 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 GPR32O75388 356 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ADRB2P07550 413 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 KRT13P13646 458 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ACLYP53396 1101 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ADKP55263 362 aaKnown RBP12.23□□□□□ -0.45
APTX-223ENST00000479656 DLG4P78352 724 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 PPP2R3AQ06190 1150 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 LRMPQ12912 555 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 BFSP1Q12934 665 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 PRPF4BQ13523 1007 aaKnown RBP12.23□□□□□ -0.45
APTX-223ENST00000479656 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
APTX-223ENST00000479656 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ZNF410Q86VK4 478 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 PPFIBP1Q86W92 1011 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 KCNF1Q9H3M0 494 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 ANKFY1Q9P2R3 1169 aa12.23□□□□□ -0.45
APTX-223ENST00000479656 AGO2Q9UKV8 859 aaKnown RBP12.23□□□□□ -0.45
APTX-223ENST00000479656 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
APTX-223ENST00000479656 A0A0B4J269 797 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 RNF225M0QZC1 329 aaPredicted RBP12.22□□□□□ -0.45
APTX-223ENST00000479656 MAPK13O15264 365 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 EXTL3O43909 919 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 TOM1L1O75674 476 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 TRIM49P0CI25 452 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 TRIM49CP0CI26 452 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 HARSP12081 509 aaKnown RBP12.22□□□□□ -0.45
APTX-223ENST00000479656 CASP14P31944 242 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 ACOT2P49753 483 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 VAMP7P51809 220 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 CDC42EP1Q00587 391 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 TMEM132AQ24JP5 1023 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 INTS8Q75QN2 995 aaKnown RBP12.22□□□□□ -0.45
APTX-223ENST00000479656 CDR2LQ86X02 465 aaPredicted RBP12.22□□□□□ -0.45
APTX-223ENST00000479656 PLEKHO2Q8TD55 490 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 FBXL18Q96ME1 805 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 CRACR2AQ9BSW2 395 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 MSTO1Q9BUK6 570 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.22□□□□□ -0.45
APTX-223ENST00000479656 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 MMRN2Q9H8L6 949 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 PRMT7Q9NVM4 692 aaPredicted RBP12.22□□□□□ -0.45
APTX-223ENST00000479656 SIK3Q9Y2K2 1263 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 SIP14410 1827 aa12.22□□□□□ -0.45
APTX-223ENST00000479656 HTTP42858 3142 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 ZNF233A6NK53 670 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 AKR1B15C9JRZ8 316 aaPredicted RBP12.21□□□□□ -0.45
APTX-223ENST00000479656 LDHAP00338 332 aaKnown RBP12.21□□□□□ -0.45
APTX-223ENST00000479656 GYPCP04921 128 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 FGFR4P22455 802 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 FXR1P51114 621 aaKnown RBP eCLIP12.21□□□□□ -0.45
APTX-223ENST00000479656 ITGA7Q13683 1181 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 MTFR1Q15390 333 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 AMHR2Q16671 573 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 FAM187BQ17R55 369 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 SEZ6Q53EL9 994 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 ATF7IP2Q5U623 682 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 CRELD2Q6UXH1 353 aaPredicted RBP12.21□□□□□ -0.45
APTX-223ENST00000479656 TSHZ1Q6ZSZ6 1077 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 SRGAP1Q7Z6B7 1085 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 MFSD14AQ96MC6 490 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 OSMRQ99650 979 aa12.21□□□□□ -0.45
APTX-223ENST00000479656 GCOM2Q9BZD3 368 aaPredicted RBP12.21□□□□□ -0.45
APTX-223ENST00000479656 TRIP12Q14669 1992 aaPredicted RBP12.21□□□□□ -0.46
APTX-223ENST00000479656 TTC26A0AVF1 554 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 RBAK-RBAKDNI3L0D1 243 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 ABLIM1O14639 778 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.46
APTX-223ENST00000479656 CABYRO75952 493 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.46
APTX-223ENST00000479656 SLC9C1Q4G0N8 1177 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 ZBTB41Q5SVQ8 909 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 C1orf220Q5T0J3 134 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 EEF1DP3Q658K8 133 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 NME8Q8N427 588 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 TC2NQ8N9U0 490 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 CCDC150Q8NCX0 1101 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 CPB2Q96IY4 423 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 POP1Q99575 1024 aaKnown RBP12.21□□□□□ -0.46
APTX-223ENST00000479656 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.46
APTX-223ENST00000479656 KIAA1586Q9HCI6 787 aa12.21□□□□□ -0.46
APTX-223ENST00000479656 PTPRHQ9HD43 1115 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms