RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 JAK3P52333 1124 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 DSG1Q02413 1049 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 PFKFB3Q16875 520 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-212ENST00000479586 UBXN11Q5T124 520 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 PARM1Q6UWI2 310 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 GLYCTKQ8IVS8 523 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 COLGALT2Q8IYK4 626 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 HDAC7Q8WUI4 952 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 ATRIPQ8WXE1 791 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 PHKBQ93100 1093 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 B3GALT6Q96L58 329 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 DDX23Q9BUQ8 820 aaKnown RBP19.47■□□□□ 0.71
HMGN1-212ENST00000479586 ZMYND12Q9H0C1 365 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 PLEKHA4Q9H4M7 779 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 ZDHHC7Q9NXF8 308 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 CNTNAP2Q9UHC6 1331 aa19.47■□□□□ 0.71
HMGN1-212ENST00000479586 ESYT2A0FGR8 921 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 GOLGA8AA7E2F4 631 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 GOLGA8BA8MQT2 603 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 EDIL3O43854 480 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 GAS2O43903 313 aaKnown RBP19.46■□□□□ 0.71
HMGN1-212ENST00000479586 GAS7O60861 476 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 SFNP31947 248 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 LMNB2Q03252 620 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 UBXN2BQ14CS0 331 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 PRKD2Q9BZL6 878 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 IFT122Q9HBG6 1241 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 USP18Q9UMW8 372 aa19.46■□□□□ 0.71
HMGN1-212ENST00000479586 PRR5-ARHGAP8B1AHC4 643 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 TGM1P22735 817 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 ARHGAP8P85298 464 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 MLF2Q15773 248 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-212ENST00000479586 XKR3Q5GH77 459 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 LRCH2Q5VUJ6 765 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 ZBTB44Q8NCP5 570 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 SECISBP2LQ93073 1101 aaKnown RBP19.45■□□□□ 0.7
HMGN1-212ENST00000479586 BORCS6Q96GS4 357 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 RIT2Q99578 217 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 RTKNQ9BST9 563 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 TEKT3Q9BXF9 490 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 EPC1Q9H2F5 836 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 C6orf50Q9HD87 102 aa19.45■□□□□ 0.7
HMGN1-212ENST00000479586 FAM170BA6NMN3 283 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 LILRB5O75023 590 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 MAFO75444 373 aaPredicted RBP19.44■□□□□ 0.7
HMGN1-212ENST00000479586 RPL17P18621 184 aaKnown RBP19.44■□□□□ 0.7
HMGN1-212ENST00000479586 CD72P21854 359 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 FSHRP23945 695 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 HOXA11P31270 313 aaPredicted RBP19.44■□□□□ 0.7
HMGN1-212ENST00000479586 NTHL1P78549 312 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 NECTIN1Q15223 517 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 LILRA6Q6PI73 481 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 TSSK4Q6SA08 328 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 MIER3Q7Z3K6 550 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 SLC5A5Q92911 643 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 CCDC136Q96JN2 1154 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 MINDY3Q9H8M7 445 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 PARD6AQ9NPB6 346 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 CHST7Q9NS84 486 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 ZSCAN32Q9NX65 697 aa19.44■□□□□ 0.7
HMGN1-212ENST00000479586 ADRB1P08588 477 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 NCLP19338 710 aaKnown RBP19.43■□□□□ 0.7
HMGN1-212ENST00000479586 PRKCQQ04759 706 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 DSC1Q08554 894 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 SLC44A4Q53GD3 710 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 PLA2G4FQ68DD2 849 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 GRASPQ7Z6J2 395 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-212ENST00000479586 SMG8Q8ND04 991 aaKnown RBP19.43■□□□□ 0.7
HMGN1-212ENST00000479586 NELL1Q92832 810 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 LTB4R2Q9NPC1 389 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 CDH7Q9ULB5 785 aa19.43■□□□□ 0.7
HMGN1-212ENST00000479586 ZFP37Q9Y6Q3 630 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-212ENST00000479586 KLF18A0A0U1RQI7 1052 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 DDX11L8A8MPP1 907 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 ZMYND10O75800 440 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 ITGA4P13612 1032 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 ADD1P35611 737 aaKnown RBP19.42■□□□□ 0.7
HMGN1-212ENST00000479586 MLH1P40692 756 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 EXOSC10Q01780 885 aaKnown RBP19.42■□□□□ 0.7
HMGN1-212ENST00000479586 GAD1Q99259 594 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 OSBPL6Q9BZF3 934 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 GPR62Q9BZJ7 368 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 COL4A3BPQ9Y5P4 624 aa19.42■□□□□ 0.7
HMGN1-212ENST00000479586 ARL5CA6NH57 179 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 PSMD10O75832 226 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 C1RP00736 705 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 SCNN1GP51170 649 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 FUT10Q6P4F1 479 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 ANO5Q75V66 913 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 RDM1Q8NG50 284 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 ZFP42Q96MM3 310 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.41■□□□□ 0.7
HMGN1-212ENST00000479586 MIOSQ9NXC5 875 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 FNIP2Q9P278 1114 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 HES2Q9Y543 173 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 IPPQ9Y573 584 aa19.41■□□□□ 0.7
HMGN1-212ENST00000479586 BAHCC1Q9P281 2608 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 SRGAP2CP0DJJ0 459 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 GNA11P29992 359 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms