RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 RIF1Q5UIP0 2472 aaKnown RBP14.85□□□□□ -0.03
ABCF1-206ENST00000479542 DMDP11532 3685 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 CCDC194A0A1B0GVG4 234 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 B4GALT3O60512 393 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 ADH1AP07327 375 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 WEE2P0C1S8 567 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 CA8P35219 290 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 DSG1Q02413 1049 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 SPIRE1Q08AE8 756 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 KIAA0319Q5VV43 1072 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 PLA2G4FQ68DD2 849 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 SMG8Q8ND04 991 aaKnown RBP14.84□□□□□ -0.03
ABCF1-206ENST00000479542 SEMA4AQ9H3S1 761 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 MFSD1Q9H3U5 465 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.84□□□□□ -0.03
ABCF1-206ENST00000479542 FAM86C1Q9NVL1 165 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 FNIP2Q9P278 1114 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 WRAP73Q9P2S5 460 aaPredicted RBP14.84□□□□□ -0.03
ABCF1-206ENST00000479542 EPS15L1Q9UBC2 864 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 GIT1Q9Y2X7 761 aa14.84□□□□□ -0.03
ABCF1-206ENST00000479542 FAM186AA6NE01 2351 aa14.83□□□□□ -0.03
ABCF1-206ENST00000479542 PRR23AA6NEV1 266 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 NR1I2O75469 434 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 BAG4O95429 457 aaKnown RBP14.83□□□□□ -0.04
ABCF1-206ENST00000479542 URODP06132 367 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 SRGAP2CP0DJJ0 459 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 XRCC6P12956 609 aaKnown RBP eCLIP14.83□□□□□ -0.04
ABCF1-206ENST00000479542 ITGA4P13612 1032 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 NPR3P17342 541 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 KANK3Q6NY19 840 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 NOTUMQ6P988 496 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.04
ABCF1-206ENST00000479542 RNF149Q8NC42 400 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 TMEM143Q96AN5 459 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 LXNQ9BS40 222 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 GBP3Q9H0R5 595 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 CSRNP2Q9H175 543 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 ANKEF1Q9NU02 776 aa14.83□□□□□ -0.04
ABCF1-206ENST00000479542 ARL5CA6NH57 179 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 DGAT1O75907 488 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 ERLIN2O94905 339 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 SLITRK3O94933 977 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 AFF1P51825 1210 aaKnown RBP14.82□□□□□ -0.04
ABCF1-206ENST00000479542 TFDP1Q14186 410 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 EMC2Q15006 297 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 LONRF3Q496Y0 759 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 CWF19L1Q69YN2 538 aaKnown RBP14.82□□□□□ -0.04
ABCF1-206ENST00000479542 ASCL5Q7RTU5 278 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 CCDC105Q8IYK2 499 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 HACE1Q8IYU2 909 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 MTRQ99707 1265 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 HSD17B14Q9BPX1 270 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 COLEC11Q9BWP8 271 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 SLKQ9H2G2 1235 aaPredicted RBP14.82□□□□□ -0.04
ABCF1-206ENST00000479542 MARCH5Q9NX47 278 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 ZDHHC7Q9NXF8 308 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.82□□□□□ -0.04
ABCF1-206ENST00000479542 IPPQ9Y573 584 aa14.82□□□□□ -0.04
ABCF1-206ENST00000479542 CCDC195A0A1B0GUA6 201 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 TEX28O15482 410 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 CCNT1O60563 726 aaKnown RBP14.81□□□□□ -0.04
ABCF1-206ENST00000479542 TSPAN1O60635 241 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 GLUD1P00367 558 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 GLUD2P49448 558 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 CREMQ03060 361 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 LILRA6Q6PI73 481 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 WASF1Q92558 559 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 BORCS6Q96GS4 357 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 AIFM3Q96NN9 605 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 SMOC2Q9H3U7 446 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 XPNPEP1Q9NQW7 623 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 MAN1C1Q9NR34 630 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 RGL1Q9NZL6 768 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 KCNJ14Q9UNX9 436 aa14.81□□□□□ -0.04
ABCF1-206ENST00000479542 ZFP37Q9Y6Q3 630 aaPredicted RBP14.81□□□□□ -0.04
ABCF1-206ENST00000479542 A0A1B0GUA9 196 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 PFKFB2O60825 505 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 POMCP01189 267 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 ARL2P36404 184 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 AK2P54819 239 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 SCRN1Q12765 414 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 AMHR2Q16671 573 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 USP41Q3LFD5 358 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 XKR9Q5GH70 373 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 GSTCDQ8NEC7 633 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 NKD2Q969F2 451 aaPredicted RBP14.8□□□□□ -0.04
ABCF1-206ENST00000479542 GAD1Q99259 594 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 PDRG1Q9NUG6 133 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 PPP4R2Q9NY27 417 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 PCDHA12Q9UN75 941 aa14.8□□□□□ -0.04
ABCF1-206ENST00000479542 MARCH6O60337 910 aa14.79□□□□□ -0.04
ABCF1-206ENST00000479542 N4BP1O75113 896 aaKnown RBP14.79□□□□□ -0.04
ABCF1-206ENST00000479542 CLUHO75153 1309 aa14.79□□□□□ -0.04
ABCF1-206ENST00000479542 OR1G1P47890 313 aa14.79□□□□□ -0.04
ABCF1-206ENST00000479542 MBTD1Q05BQ5 628 aa14.79□□□□□ -0.04
ABCF1-206ENST00000479542 ERICH6BQ5W0A0 696 aa14.79□□□□□ -0.04
ABCF1-206ENST00000479542 PHLDB3Q6NSJ2 640 aa14.79□□□□□ -0.04
ABCF1-206ENST00000479542 PIK3AP1Q6ZUJ8 805 aa14.79□□□□□ -0.04
ABCF1-206ENST00000479542 RTL10Q7L3V2 364 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms