RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 NDNQ99608 321 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 TXLNGYQ9BZA5 131 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 NEUROG2Q9H2A3 272 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 CNNM2Q9H8M5 875 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 B4E1Z4 1266 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 PGRMC1O00264 195 aaKnown RBP14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 MAP3K13O43283 966 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 PEX11AO75192 247 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 UNC5CO95185 931 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 CYP2C8P10632 490 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 ADD2P35612 726 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 JAG1P78504 1218 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 BTNL9Q6UXG8 535 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 KIF2BQ8N4N8 673 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 DYDC1Q8WWB3 177 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 SYN2Q92777 582 aaPredicted RBP14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 PTPRN2Q92932 1015 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 AZIN2Q96A70 460 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 PRMT1Q99873 361 aaKnown RBP14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 TMEM109Q9BVC6 243 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 RNF26Q9BY78 433 aaPredicted RBP14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 CRNKL1Q9BZJ0 848 aaKnown RBP14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 LRMDAQ9H2I8 198 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 MAPK8IP1Q9UQF2 711 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 SIK3Q9Y2K2 1263 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 PTCH2Q9Y6C5 1203 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 PTPRFP10586 1907 aa14.15□□□□□ -0.14
CNKSR3-204ENST00000479339 RGS16O15492 202 aaPredicted RBP14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 SKIP12755 728 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 SLC1A4P43007 532 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 TRAPPC10P48553 1259 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 RPS6KA1Q15418 735 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 ENOX2Q16206 610 aaKnown RBP14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 MUM1Q2TAK8 710 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 CCDC178Q5BJE1 867 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 TTC38Q5R3I4 469 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 RNF220Q5VTB9 566 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 RNF43Q68DV7 783 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 TATDN1Q6P1N9 297 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 NEK9Q8TD19 979 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 P2RX5Q93086 422 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 PPP1R14BQ96C90 147 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 IWS1Q96ST2 819 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 DUSP9Q99956 384 aaKnown RBP14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 PUS7LQ9H0K6 701 aaKnown RBP14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 UTP11Q9Y3A2 253 aaKnown RBP14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 FTCDO95954 541 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 CTGFP29279 349 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 LONP1P36776 959 aaKnown RBP14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 TREML2Q5T2D2 321 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 PDXDC1Q6P996 788 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 TMTC2Q8N394 836 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 INPP5DQ92835 1189 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 FMO2Q99518 471 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 MYL10Q9BUA6 226 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 LARSQ9P2J5 1176 aaKnown RBP14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 SERPINB13Q9UIV8 391 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 PNMA3Q9UL41 463 aa14.14□□□□□ -0.15
CNKSR3-204ENST00000479339 ATAD5Q96QE3 1844 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 MAGEA13PA6NCF6 341 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 LRRC53A6NM62 1247 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 LOC285556D6RIA3 1793 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 DEUP1Q05D60 604 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 PABPC4Q13310 644 aaKnown RBP eCLIP14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 ACVR2BQ13705 512 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 SLC9C1Q4G0N8 1177 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 ATP8B4Q8TF62 1192 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 GBP5Q96PP8 586 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■■■□ 22.3
CNKSR3-204ENST00000479339 PHF20Q9BVI0 1012 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 IQCGQ9H095 443 aaKnown RBP14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 PABPC3Q9H361 631 aaKnown RBP14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 MAGEF1Q9HAY2 307 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 AIPL1Q9NZN9 384 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 STOML1Q9UBI4 398 aa14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 NKX1-2Q9UD57 310 aaPredicted RBP14.13□□□□□ -0.15
CNKSR3-204ENST00000479339 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 DAPK3O43293 454 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 GDF11O95390 407 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 CCDC166P0CW27 439 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 HOXD10P28358 340 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 FLT3P36888 993 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 USP11P51784 963 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 HMGCS2P54868 508 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 BACE1P56817 501 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 GFPT1Q06210 699 aaPredicted RBP14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 EHHADHQ08426 723 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 UBE3CQ15386 1083 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 CNGA2Q16280 664 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 PPP2R5EQ16537 467 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 GSTA3Q16772 222 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 SHROOM1Q2M3G4 852 aaPredicted RBP14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 COBLL1Q53SF7 1204 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 ARL6IP4Q66PJ3 421 aaKnown RBP14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 DENND2CQ68D51 928 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 ZNF365Q70YC5 407 aa14.12□□□□□ -0.15
CNKSR3-204ENST00000479339 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms