RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 APTXQ7Z2E3 356 aaKnown RBP14.36□□□□□ -0.11
CHD3-210ENST00000479080 RSPH3Q86UC2 560 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 CAGE1Q8TC20 777 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 TMEM174Q8WUU8 243 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 SCLT1Q96NL6 688 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 ANP32EQ9BTT0 268 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 MRPL4Q9BYD3 311 aaKnown RBP14.36□□□□□ -0.11
CHD3-210ENST00000479080 CDT1Q9H211 546 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 TMX1Q9H3N1 280 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 PCIF1Q9H4Z3 704 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 KCNG1Q9UIX4 513 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 MROH7Q68CQ1 1323 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 HNRNPDLO14979 420 aaKnown RBP14.35□□□□□ -0.11
CHD3-210ENST00000479080 MGEA5O60502 916 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 AKAP3O75969 853 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 KIF20AO95235 890 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 ADRB2P07550 413 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 SELPP16109 830 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 SCP2P22307 547 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 CD52P31358 61 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 WNT7BP56706 349 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 CDC42EP1Q00587 391 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 STRN3Q13033 797 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 PRPF4BQ13523 1007 aaKnown RBP14.35□□□□□ -0.11
CHD3-210ENST00000479080 HSP90AA4PQ58FG1 418 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 CRELD2Q6UXH1 353 aaPredicted RBP14.35□□□□□ -0.11
CHD3-210ENST00000479080 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 SLC9A9Q8IVB4 645 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 SYCP3Q8IZU3 236 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 CEP120Q8N960 986 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 PLEKHO2Q8TD55 490 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 LINC01599Q8WXQ3 324 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 TRIM43Q96BQ3 446 aaPredicted RBP14.35□□□□□ -0.11
CHD3-210ENST00000479080 BORCS6Q96GS4 357 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 PRIMPOLQ96LW4 560 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 SRRTQ9BXP5 876 aaKnown RBP14.35□□□□□ -0.11
CHD3-210ENST00000479080 AGPAT5Q9NUQ2 364 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 TNFSF13BQ9Y275 285 aa14.35□□□□□ -0.11
CHD3-210ENST00000479080 A0A0B4J269 797 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 BICDL2A1A5D9 508 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 TLR3O15455 904 aaKnown RBP14.34□□□□□ -0.11
CHD3-210ENST00000479080 TOM1L1O75674 476 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 CAVIN2O95810 425 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 RPLP2P05387 115 aaKnown RBP14.34□□□□□ -0.11
CHD3-210ENST00000479080 NR2F2P24468 414 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 LIG4P49917 911 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 CYP2J2P51589 502 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 MCL1Q07820 350 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 DSC3Q14574 896 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 SEZ6Q53EL9 994 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 ATF7IP2Q5U623 682 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 CATSPER4Q7RTX7 472 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 CSGALNACT2Q8N6G5 542 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 SAAL1Q96ER3 474 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 SCLYQ96I15 445 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 FBXL18Q96ME1 805 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 PPP1R12CQ9BZL4 782 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 NAT10Q9H0A0 1025 aaKnown RBP14.34□□□□□ -0.11
CHD3-210ENST00000479080 HSPBP1Q9NZL4 362 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 ST3GAL5Q9UNP4 418 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 EXOC7Q9UPT5 735 aa14.34□□□□□ -0.11
CHD3-210ENST00000479080 A0A1B0GUA9 196 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 GOLGA8IPA6NC78 632 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 GOLGA8JA6NMD2 632 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 DCDC2CA8MYV0 355 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 M0QZ92 97 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 CALUO43852 315 aaPredicted RBP14.33□□□□□ -0.12
CHD3-210ENST00000479080 RPS6KA5O75582 802 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 CLTBP09497 229 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 GARTP22102 1010 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 CYP2C18P33260 490 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 ABCD1P33897 745 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 TNFSF9P41273 254 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 BFSP2Q13515 415 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 ARMCX5Q6P1M9 558 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 MPZL3Q6UWV2 235 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 HS2ST1Q7LGA3 356 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 ZBTB33Q86T24 672 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 CBWD2Q8IUF1 395 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 TMEM192Q8IY95 271 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 BICD1Q96G01 975 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 TSG101Q99816 390 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 EIF2AQ9BY44 585 aaKnown RBP14.33□□□□□ -0.12
CHD3-210ENST00000479080 HIPK3Q9H422 1215 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 THAP9Q9H5L6 903 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 PADI3Q9ULW8 664 aa14.33□□□□□ -0.12
CHD3-210ENST00000479080 KIAA0355O15063 1070 aa14.32□□□□□ -0.12
CHD3-210ENST00000479080 ERLIN2O94905 339 aa14.32□□□□□ -0.12
CHD3-210ENST00000479080 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHD3-210ENST00000479080 CCL23P55773 120 aa14.32□□□□□ -0.12
CHD3-210ENST00000479080 MCCD1P59942 119 aaPredicted RBP14.32□□□□□ -0.12
CHD3-210ENST00000479080 SNRPFP62306 86 aaKnown RBP14.32□□□□□ -0.12
CHD3-210ENST00000479080 FKBP3Q00688 224 aaKnown RBP14.32□□□□□ -0.12
CHD3-210ENST00000479080 ADAM9Q13443 819 aa14.32□□□□□ -0.12
CHD3-210ENST00000479080 MYBPC2Q14324 1141 aa14.32□□□□□ -0.12
CHD3-210ENST00000479080 C1orf220Q5T0J3 134 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms