RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 C1QL4Q86Z23 238 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 TXNDC5Q8NBS9 432 aaKnown RBP6.76□□□□□ -1.33
CCDC171-207ENST00000478913 NUDT10Q8NFP7 164 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 NUDT11Q96G61 164 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 AHCYL2Q96HN2 611 aaKnown RBP6.76□□□□□ -1.33
CCDC171-207ENST00000478913 YTHDC1Q96MU7 727 aaKnown RBP6.76□□□□□ -1.33
CCDC171-207ENST00000478913 PUS7LQ9H0K6 701 aaKnown RBP6.76□□□□□ -1.33
CCDC171-207ENST00000478913 VTA1Q9NP79 307 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 HOMER2Q9NSB8 354 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 INO80Q9ULG1 1556 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-207ENST00000478913 ABCA3Q99758 1704 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 NWD2Q9ULI1 1742 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 TECPR2O15040 1411 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 PNPLA7Q6ZV29 1317 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 VCANP13611 3396 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 FYCO1Q9BQS8 1478 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 PIK3R4Q99570 1358 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 ELL2O00472 640 aaPredicted RBP6.75□□□□□ -1.33
CCDC171-207ENST00000478913 MAFGO15525 162 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 MAFO75444 373 aaPredicted RBP6.75□□□□□ -1.33
CCDC171-207ENST00000478913 RGL3Q3MIN7 710 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 ZBTB41Q5SVQ8 909 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 KANSL1Q7Z3B3 1105 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 ZNF761Q86XN6 746 aaPredicted RBP6.75□□□□□ -1.33
CCDC171-207ENST00000478913 SP8Q8IXZ3 490 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 RPUSD2Q8IZ73 545 aaKnown RBP6.75□□□□□ -1.33
CCDC171-207ENST00000478913 IFNL2Q8IZJ0 200 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 MTMR8Q96EF0 704 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 ANO3Q9BYT9 981 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 BARX1Q9HBU1 254 aaPredicted RBP6.75□□□□□ -1.33
CCDC171-207ENST00000478913 TFCP2L1Q9NZI6 479 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 ADAMTS13Q76LX8 1427 aa6.75□□□□□ -1.33
CCDC171-207ENST00000478913 A0A0G2JNJ9 132 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 CUTAO60888 179 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 ZSCAN22P10073 491 aaPredicted RBP6.74□□□□□ -1.33
CCDC171-207ENST00000478913 KCNC1P48547 511 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 MANFP55145 182 aaKnown RBP6.74□□□□□ -1.33
CCDC171-207ENST00000478913 TMEM200BQ69YZ2 307 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 UNQ6494/PRO21346Q6UXR6 183 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 OR5AN1Q8NGI8 311 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 LCORQ96JN0 433 aaPredicted RBP6.74□□□□□ -1.33
CCDC171-207ENST00000478913 ACAP3Q96P50 834 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 MTG2Q9H4K7 406 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 C14orf119Q9NWQ9 140 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 KCMF1Q9P0J7 381 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 Q9UFV3 132 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 PPP2R3BQ9Y5P8 575 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 CLIP1P30622 1438 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 TROQ12816 1431 aaPredicted RBP6.74□□□□□ -1.33
CCDC171-207ENST00000478913 WASHC2AQ641Q2 1341 aa6.74□□□□□ -1.33
CCDC171-207ENST00000478913 PLEKHG2Q9H7P9 1386 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 GOLGA8AA7E2F4 631 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 GOLGA8BA8MQT2 603 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 KATNA1O75449 491 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 HMGCRP04035 888 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 CLEC2LP0C7M8 214 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 ETV4P43268 484 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 KCNQ1P51787 676 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 SCAND1P57086 179 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 GJA9P57773 515 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 ITKQ08881 620 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 TOP3AQ13472 1001 aaPredicted RBP6.73□□□□□ -1.33
CCDC171-207ENST00000478913 MTMR1Q13613 665 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 PDCD1Q15116 288 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 DGKDQ16760 1214 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 Q6ZUG5 572 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 FAM124AQ86V42 546 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 REXO1L1PQ8IX06 675 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 ANKRD13AQ8IZ07 590 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 KLHL36Q8N4N3 616 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 WNT8AQ9H1J5 351 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 LUC7LQ9NQ29 371 aaKnown RBP6.73□□□□□ -1.33
CCDC171-207ENST00000478913 CDC42EP3Q9UKI2 254 aa6.73□□□□□ -1.33
CCDC171-207ENST00000478913 PREX2Q70Z35 1606 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 LRPPRCP42704 1394 aaKnown RBP6.72□□□□□ -1.33
CCDC171-207ENST00000478913 PRSS38A1L453 326 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 MROH6A6NGR9 719 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 TRIM13O60858 407 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 PCDH8O95206 1070 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 EIF4HQ15056 248 aaKnown RBP6.72□□□□□ -1.33
CCDC171-207ENST00000478913 CCDC62Q6P9F0 684 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 CMIPQ8IY22 773 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 MENTQ9BUN1 341 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 TRIM8Q9BZR9 551 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 PITHD1Q9GZP4 211 aaPredicted RBP6.72□□□□□ -1.33
CCDC171-207ENST00000478913 SAE1Q9UBE0 346 aaPredicted RBP6.72□□□□□ -1.33
CCDC171-207ENST00000478913 TRHDEQ9UKU6 1024 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 DENND2AQ9ULE3 1009 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 ZDHHC9Q9Y397 364 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 RIMS2Q9UQ26 1411 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 MYPNQ86TC9 1320 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 TRIOBPQ9H2D6 2365 aa6.72□□□□□ -1.33
CCDC171-207ENST00000478913 KIF15Q9NS87 1388 aa6.71□□□□□ -1.33
CCDC171-207ENST00000478913 K7ESF4 209 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 OPHN1O60890 802 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 BMP7P18075 431 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms