RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 NPEPPSP55786 919 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 CENPQQ7L2Z9 268 aaPredicted RBP10.79□□□□□ -0.68
CCM2-210ENST00000478169 COLGALT2Q8IYK4 626 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 RNF168Q8IYW5 571 aaPredicted RBP10.79□□□□□ -0.68
CCM2-210ENST00000478169 TCP11Q8WWU5 503 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 CEP170P1Q96L14 293 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 FAM20AQ96MK3 541 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 HERC2P3Q9BVR0 1158 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 MINDY3Q9H8M7 445 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 RXFP1Q9HBX9 757 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 NCOA5Q9HCD5 579 aaKnown RBP10.79□□□□□ -0.68
CCM2-210ENST00000478169 MAN1C1Q9NR34 630 aa10.79□□□□□ -0.68
CCM2-210ENST00000478169 CACNA1AO00555 2505 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 EML1O00423 815 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 C2CD2LO14523 706 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 N4BP1O75113 896 aaKnown RBP10.78□□□□□ -0.68
CCM2-210ENST00000478169 GLUD1P00367 558 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 ITGA4P13612 1032 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 GBP2P32456 591 aaPredicted RBP10.78□□□□□ -0.68
CCM2-210ENST00000478169 GLUD2P49448 558 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 AK2P54819 239 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 DSG1Q02413 1049 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 LAMTOR4Q0VGL1 99 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 NPY5RQ15761 445 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 KIAA0319Q5VV43 1072 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 OTUD6AQ7L8S5 288 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 KRT25Q7Z3Z0 450 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 C4orf19Q8IY42 314 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 GPR65Q8IYL9 337 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 SLC44A3Q8N4M1 653 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
CCM2-210ENST00000478169 TMEM143Q96AN5 459 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 CCDC51Q96ER9 411 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 SLKQ9H2G2 1235 aaPredicted RBP10.78□□□□□ -0.68
CCM2-210ENST00000478169 PLEKHA4Q9H4M7 779 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 KCNMB3Q9NPA1 279 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 MARCH5Q9NX47 278 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 VAV3Q9UKW4 847 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 CLUHO75153 1309 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 MIA3Q5JRA6 1907 aa10.78□□□□□ -0.68
CCM2-210ENST00000478169 ARL5CA6NH57 179 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 STK25O00506 426 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 CPLX1O14810 134 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 TBX3O15119 743 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 NARSO43776 548 aaKnown RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 SLC37A4O43826 429 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 NR1I2O75469 434 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 ERLIN2O94905 339 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 SRFP11831 508 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 GCFC2P16383 781 aaKnown RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 OR1G1P47890 313 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 POU5F1BQ06416 359 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 DSC1Q08554 894 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 NCBP1Q09161 790 aaKnown RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 EPHA7Q15375 998 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 INF2Q27J81 1249 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 PPP4R3AQ6IN85 833 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 NOTUMQ6P988 496 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 CPLX2Q6PUV4 134 aaKnown RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 RUFY3Q7L099 469 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 TAS1R1Q7RTX1 841 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 FERMT3Q86UX7 667 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 SKAP1Q86WV1 359 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 SMG7Q92540 1137 aaKnown RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 COLEC11Q9BWP8 271 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCM2-210ENST00000478169 CHST7Q9NS84 486 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCM2-210ENST00000478169 PRG3Q9Y2Y8 225 aaPredicted RBP10.77□□□□□ -0.69
CCM2-210ENST00000478169 IPPQ9Y573 584 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 DCHS1Q96JQ0 3298 aa10.77□□□□□ -0.69
CCM2-210ENST00000478169 OTOGLQ3ZCN5 2332 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 CCDC194A0A1B0GVG4 234 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 KRBA1A5PL33 1030 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 REC8O95072 547 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 CFHP08603 1231 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 RFX1P22670 979 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 YWHABP31946 246 aaKnown RBP10.76□□□□□ -0.69
CCM2-210ENST00000478169 PTENP60484 403 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 TOB2Q14106 344 aaPredicted RBP10.76□□□□□ -0.69
CCM2-210ENST00000478169 MXD4Q14582 209 aaPredicted RBP10.76□□□□□ -0.69
CCM2-210ENST00000478169 EMC2Q15006 297 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 PHLDB3Q6NSJ2 640 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 NEK8Q86SG6 692 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 IFNLR1Q8IU57 520 aaPredicted RBP10.76□□□□□ -0.69
CCM2-210ENST00000478169 HACE1Q8IYU2 909 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 RSAD2Q8WXG1 361 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 ZNF707Q96C28 371 aaPredicted RBP10.76□□□□□ -0.69
CCM2-210ENST00000478169 MYADMQ96S97 322 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 GAD1Q99259 594 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 MTRQ99707 1265 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 NAP1L4Q99733 375 aaKnown RBP10.76□□□□□ -0.69
CCM2-210ENST00000478169 LXNQ9BS40 222 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 NT5C3AQ9H0P0 336 aa10.76□□□□□ -0.69
CCM2-210ENST00000478169 CSRNP2Q9H175 543 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms