RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 GPS2Q13227 327 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 FAM153CQ494X1 144 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 NOL9Q5SY16 702 aaKnown RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 SLFN11Q7Z7L1 901 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 NOP9Q86U38 636 aaKnown RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 SLC47A2Q86VL8 602 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 RDM1Q8NG50 284 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 KIFAP3Q92845 792 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 BICD1Q96G01 975 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 NTPCRQ9BSD7 190 aaKnown RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 FAM153AQ9UHL3 310 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 NFU1Q9UMS0 254 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 EXOC7Q9UPT5 735 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 FTLP02792 175 aaPredicted RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 TMEM253P0C7T8 217 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 SUPT20HL2P0C7V6 817 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 CYP2C19P33261 490 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 HNRNPH2P55795 449 aaKnown RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 STXBP2Q15833 593 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 IFI16Q16666 785 aaKnown RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 GNPTABQ3T906 1256 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 GADL1Q6ZQY3 521 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 TMEM174Q8WUU8 243 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 CTNNBL1Q8WYA6 563 aaPredicted RBP9.6□□□□□ -0.87
CDHR3-211ENST00000478080 TATDN2Q93075 761 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 CLMNQ96JQ2 1002 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 IWS1Q96ST2 819 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 PAGR1Q9BTK6 254 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 ATP6V0A4Q9HBG4 840 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 RNF14Q9UBS8 474 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 INTUQ9ULD6 942 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 NFASCO94856 1347 aa9.6□□□□□ -0.87
CDHR3-211ENST00000478080 ARID2Q68CP9 1835 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 A0A0A6YYK5 440 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 IRF6O14896 467 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 DGAT1O75907 488 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 MMEP08473 750 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 CHRNB2P17787 502 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 NAA35Q5VZE5 725 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 MIS18BP1Q6P0N0 1132 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ADAT2Q7Z6V5 191 aaKnown RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 NCAPG2Q86XI2 1143 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 CASKIN2Q8WXE0 1202 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 RFFLQ8WZ73 363 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ZBTB45Q96K62 511 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 DDX47Q9H0S4 455 aaKnown RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ELP3Q9H9T3 547 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 TMEM59LQ9UK28 342 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 WDR90Q96KV7 1748 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 SYNGAP1Q96PV0 1343 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 MYH9P35579 1960 aaKnown RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 SOWAHBA6NEL2 793 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 TMEM110-MUSTN1A8MSY1 372 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 P4HA2O15460 535 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 CCDC172P0C7W6 258 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ACOT2P49753 483 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ALDH5A1P51649 535 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 POLGP54098 1239 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 PPATQ06203 517 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ZNF211Q13398 564 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 EMC2Q15006 297 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 SKIDA1Q1XH10 827 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 HSP90B2PQ58FF3 399 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 DCAF12L1Q5VU92 463 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 KRT39Q6A163 491 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 AADACL2Q6P093 401 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 FOXR1Q6PIV2 292 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 LBX2Q6XYB7 198 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 SV2AQ7L0J3 742 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 CPNE8Q86YQ8 564 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 CCDC125Q86Z20 511 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 MSL3Q8N5Y2 521 aaKnown RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ASAP3Q8TDY4 903 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 HES6Q96HZ4 224 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 HAPLN2Q9GZV7 340 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 VIPAS39Q9H9C1 493 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 ZNF302Q9NR11 478 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 SUCLA2Q9P2R7 463 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-211ENST00000478080 NR2E1Q9Y466 385 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 NCANO14594 1321 aa9.59□□□□□ -0.87
CDHR3-211ENST00000478080 MAPK13O15264 365 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 RNF40O75150 1001 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 EDN1P05305 212 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 UBA1P22314 1058 aaKnown RBP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 COPB2P35606 906 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 LMAN1P49257 510 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 PRPF4BQ13523 1007 aaKnown RBP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 SEZ6Q53EL9 994 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 XKR3Q5GH77 459 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 ZBTB41Q5SVQ8 909 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 SCARA3Q6AZY7 606 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms