RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PAPD7Q5XG87 772 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 MAP1SQ66K74 1059 aaPredicted RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 KRT39Q6A163 491 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 DPY19L2P1Q6NXN4 242 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 ZBTB8OSQ8IWT0 167 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 PSPC1Q8WXF1 523 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 BRI3BPQ8WY22 251 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 POMGNT1Q8WZA1 660 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 ANKRD7Q92527 254 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 UBXN4Q92575 508 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 DHX38Q92620 1227 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 GLG1Q92896 1179 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 BICD1Q96G01 975 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 SPATA33Q96N06 139 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 NOX5Q96PH1 765 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 WDR24Q96S15 920 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 CBWD1Q9BRT8 395 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 NFKBIZQ9BYH8 718 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 INTS2Q9H0H0 1204 aaKnown RBP8.62□□□□□ -1.03
VMA21-203ENST00000477649 GPRC5CQ9NQ84 441 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 ERAP1Q9NZ08 941 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 RNF14Q9UBS8 474 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 GUCA1BQ9UMX6 200 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 JRKLQ9Y4A0 524 aa8.62□□□□□ -1.03
VMA21-203ENST00000477649 A0A0A6YYK5 440 aaPredicted RBP8.61□□□□□ -1.03
VMA21-203ENST00000477649 IGKV6-21A0A0C4DH24 114 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 PPFIA4O75335 1185 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 CELF2O95319 508 aaKnown RBP8.61□□□□□ -1.03
VMA21-203ENST00000477649 PGK2P07205 417 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 GLRA2P23416 452 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 ADORA2AP29274 412 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 GPC3P51654 580 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 MFAP3P55082 362 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 CLDN10P78369 228 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 SP4Q02446 784 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 GRB14Q14449 540 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 PSMD6Q15008 389 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 NAB2Q15742 525 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 KYAT1Q16773 422 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 EPC2Q52LR7 807 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 CDCA2Q69YH5 1023 aaPredicted RBP8.61□□□□□ -1.03
VMA21-203ENST00000477649 IQSEC1Q6DN90 963 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 ARMCX2Q7L311 632 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 IRF2BP2Q7Z5L9 587 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 SRGAP1Q7Z6B7 1085 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 PLEKHH3Q7Z736 793 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 SLC35F6Q8N357 371 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 PPTC7Q8NI37 304 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 PARD3BQ8TEW8 1205 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 LMBR1Q8WVP7 490 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 BSNDQ8WZ55 320 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 RABGGTAQ92696 567 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 PCYT2Q99447 389 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 MRPL4Q9BYD3 311 aaKnown RBP8.61□□□□□ -1.03
VMA21-203ENST00000477649 ABHD16BQ9H3Z7 469 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 ZNF408Q9H9D4 720 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 POLD4Q9HCU8 107 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 SIX2Q9NPC8 291 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 ARGLU1Q9NWB6 273 aaPredicted RBP8.61□□□□□ -1.03
VMA21-203ENST00000477649 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.61□□□□□ -1.03
VMA21-203ENST00000477649 DNAJC12Q9UKB3 198 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 ZNF215Q9UL58 517 aaPredicted RBP8.61□□□□□ -1.03
VMA21-203ENST00000477649 FHOD1Q9Y613 1164 aa8.61□□□□□ -1.03
VMA21-203ENST00000477649 TMEM150BA6NC51 233 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 F8VZ95 297 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 TLR2O60603 784 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 CYP2C8P10632 490 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 TCP1P17987 556 aaKnown RBP8.6□□□□□ -1.03
VMA21-203ENST00000477649 MCM3P25205 808 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 TMOD1P28289 359 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 ADSSP30520 456 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 ITIH3Q06033 890 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 CYP24A1Q07973 514 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 FSTL1Q12841 308 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 KIF22Q14807 665 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 DRAP1Q14919 205 aaPredicted RBP8.6□□□□□ -1.03
VMA21-203ENST00000477649 MAPK6Q16659 721 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 LY6KQ17RY6 165 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 CBWD6Q4V339 395 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 CBWD3Q5JTY5 395 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 CBWD5Q5RIA9 395 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 PPP1R2P3Q6NXS1 205 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 ADGRD1Q6QNK2 874 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 DPP9Q86TI2 863 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 KSR1Q8IVT5 923 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 ANKRD13CQ8N6S4 541 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
VMA21-203ENST00000477649 FBXL13Q8NEE6 735 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 LMO3Q8TAP4 145 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 GOLGA1Q92805 767 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 FNBP1Q96RU3 617 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.6□□□□□ -1.03
VMA21-203ENST00000477649 PCIF1Q9H4Z3 704 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 BCAS3Q9H6U6 928 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 RRAGCQ9HB90 399 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
VMA21-203ENST00000477649 AGO2Q9UKV8 859 aaKnown RBP8.6□□□□□ -1.03
VMA21-203ENST00000477649 SAR1BQ9Y6B6 198 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms