RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 RNF135Q8IUD6 432 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 SMG8Q8ND04 991 aaKnown RBP17.41■□□□□ 0.38
CLDN11-204ENST00000477531 APOL6Q9BWW8 343 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 EIF2AQ9BY44 585 aaKnown RBP17.41■□□□□ 0.38
CLDN11-204ENST00000477531 ZBP1Q9H171 429 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 GPRC5CQ9NQ84 441 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 PRMT7Q9NVM4 692 aaPredicted RBP17.41■□□□□ 0.38
CLDN11-204ENST00000477531 GIT1Q9Y2X7 761 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 PRR33A8MZF0 331 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 H3BQV1 296 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 LAD1O00515 517 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 CLASP2O75122 1294 aaKnown RBP17.4■□□□□ 0.38
CLDN11-204ENST00000477531 DDHD2O94830 711 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 CYP11B2P19099 503 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 MCM2P49736 904 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 PTGDRQ13258 359 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 PDIA5Q14554 519 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 PPP2R5AQ15172 486 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 AMHR2Q16671 573 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 SLC27A1Q6PCB7 646 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 TMEM173Q86WV6 379 aaPredicted RBP17.4■□□□□ 0.38
CLDN11-204ENST00000477531 RPGRIP1Q96KN7 1286 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 IFT74Q96LB3 600 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 GAD1Q99259 594 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 APOL5Q9BWW9 433 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 EMILIN2Q9BXX0 1053 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 HCFC2Q9Y5Z7 792 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 IRAK3Q9Y616 596 aa17.4■□□□□ 0.38
CLDN11-204ENST00000477531 ARL5CA6NH57 179 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 NRP1O14786 923 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 NPTXRO95502 500 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 MLH1P40692 756 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 OR1G1P47890 313 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 NBR1Q14596 966 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 CBX2Q14781 532 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-204ENST00000477531 MAPK6Q16659 721 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 SYCE2Q6PIF2 218 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 C4orf32Q8N8J7 132 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 DEPTORQ8TB45 409 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 SNX29Q8TEQ0 813 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 AUTS2Q8WXX7 1259 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 SUSD6Q92537 303 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 TMX3Q96JJ7 454 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 S1PR5Q9H228 398 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 DZANK1Q9NVP4 752 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 MUTYHQ9UIF7 546 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 SSX2IPQ9Y2D8 614 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 HES2Q9Y543 173 aa17.39■□□□□ 0.37
CLDN11-204ENST00000477531 A0A1B0GUA9 196 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 SPDYE4A6NLX3 237 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 B4GALT5O43286 388 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 AFF1P51825 1210 aaKnown RBP17.38■□□□□ 0.37
CLDN11-204ENST00000477531 ITIH3Q06033 890 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 HERC4Q5GLZ8 1057 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-204ENST00000477531 KRT79Q5XKE5 535 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-204ENST00000477531 DTHD1Q6ZMT9 781 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 KIFAP3Q92845 792 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 NECTIN4Q96NY8 510 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 BHMT2Q9H2M3 363 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 NXF3Q9H4D5 531 aaKnown RBP17.38■□□□□ 0.37
CLDN11-204ENST00000477531 C11orf16Q9NQ32 467 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 MRPL17Q9NRX2 175 aaKnown RBP17.38■□□□□ 0.37
CLDN11-204ENST00000477531 PARP2Q9UGN5 583 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 RAPGEFL1Q9UHV5 662 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 KIAA1024Q9UPX6 916 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 DNM3Q9UQ16 869 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 PRG3Q9Y2Y8 225 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-204ENST00000477531 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
CLDN11-204ENST00000477531 N4BP3O15049 544 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 INPPL1O15357 1258 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 URODP06132 367 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 LIG1P18858 919 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 NAMPTP43490 491 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 TOB1P50616 345 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-204ENST00000477531 SCNN1GP51170 649 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 PRPF4BQ13523 1007 aaKnown RBP17.37■□□□□ 0.37
CLDN11-204ENST00000477531 FAM187BQ17R55 369 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 RILPL1Q5EBL4 403 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 CDR2LQ86X02 465 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-204ENST00000477531 COLGALT2Q8IYK4 626 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 BCL7CQ8WUZ0 217 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-204ENST00000477531 RIPOR3Q96MK2 946 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 RPS6KC1Q96S38 1066 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 ADPGKQ9BRR6 497 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 COLEC11Q9BWP8 271 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 ADAM7Q9H2U9 754 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 FZD8Q9H461 694 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 DDX19AQ9NUU7 478 aaKnown RBP17.37■□□□□ 0.37
CLDN11-204ENST00000477531 DAXXQ9UER7 740 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-204ENST00000477531 NR2E1Q9Y466 385 aa17.37■□□□□ 0.37
CLDN11-204ENST00000477531 B4GALT3O60512 393 aa17.36■□□□□ 0.37
CLDN11-204ENST00000477531 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLDN11-204ENST00000477531 PRKCBP05771 671 aa17.36■□□□□ 0.37
CLDN11-204ENST00000477531 AKAP5P24588 427 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms