RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 C12orf49Q9H741 205 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 CD248Q9HCU0 757 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 BLOC1S6Q9UL45 172 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 PALD1Q9ULE6 856 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 TMCO1Q9UM00 188 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 WDR37Q9Y2I8 494 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 C15orf41Q9Y2V0 281 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 DISP2A7MBM2 1401 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 TNS2Q63HR2 1409 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 MAP3K15Q6ZN16 1313 aa5.19□□□□□ -1.58
PTCD3-212ENST00000477520 MEGF6O75095 1541 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RBM47A0AV96 593 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 ANO9A1A5B4 782 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 ZC3H12DA2A288 527 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 LRRIQ3A6PVS8 624 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 H3BQV1 296 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 MYO1FO00160 1098 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 ZSCAN9O15535 394 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CREB3O43889 395 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 PRICKLE3O43900 615 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CEP104O60308 925 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 N4BP1O75113 896 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 GNAI2P04899 355 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 VSNL1P62760 191 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 PLP2Q04941 152 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RESTQ13127 1097 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 KCNB1Q14721 858 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 MTHFSDQ2M296 383 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CFAP100Q494V2 611 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RRP12Q5JTH9 1297 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 SPECC1Q5M775 1068 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 KLHL10Q6JEL2 608 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CNKSR3Q6P9H4 555 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CCNI2Q6ZMN8 369 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CCDC80Q76M96 950 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 BZW1Q7L1Q6 419 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 KRT27Q7Z3Y8 459 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 FAM129CQ86XR2 697 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 TMTC1Q8IUR5 882 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 TMEM139Q8IV31 216 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CNGA4Q8IV77 575 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 FAM114A1Q8IWE2 563 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 LMNTD2Q8IXW0 634 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 C16orf71Q8IYS4 520 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RNF168Q8IYW5 571 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 TRIML1Q8N9V2 468 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 LSM14AQ8ND56 463 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 B4GALNT2Q8NHY0 566 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CYB5D2Q8WUJ1 264 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RNF141Q8WVD5 230 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 C17orf50Q8WW18 174 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CAVIN3Q969G5 261 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 IQCDQ96DY2 449 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 GPATCH3Q96I76 525 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RBM41Q96IZ5 413 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 PHACTR3Q96KR7 559 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 TRAPPC9Q96Q05 1148 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CTAGE1Q96RT6 745 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 WDR24Q96S15 920 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 LZTS2Q9BRK4 669 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 FAM192AQ9GZU8 254 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 LSG1Q9H089 658 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 VCXQ9H320 206 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 VCX3BQ9H321 246 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 PRDM16Q9HAZ2 1276 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 VCX3AQ9NNX9 186 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 LUC7LQ9NQ29 371 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RNF14Q9UBS8 474 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 FAM8A1Q9UBU6 413 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 RGS17Q9UGC6 210 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 CORINQ9Y5Q5 1042 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 GRIN2DO15399 1336 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 USP42Q9H9J4 1324 aaKnown RBP5.18□□□□□ -1.58
PTCD3-212ENST00000477520 TUBGCP6Q96RT7 1819 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 WNK3Q9BYP7 1800 aa5.18□□□□□ -1.58
PTCD3-212ENST00000477520 PKD1L3Q7Z443 1732 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 GLI3P10071 1580 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 C5orf60A6NFR6 353 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ERVV-2B6SEH9 535 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 TMEM232C9JQI7 657 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 AKR1B15C9JRZ8 316 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 CYP27B1O15528 508 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PRPF3O43395 683 aaKnown RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 E2F6O75461 281 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 GLRX3O76003 335 aaKnown RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 IDO1P14902 403 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PHKG2P15735 406 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PRLRP16471 622 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ZFXP17010 805 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 DESP17661 470 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 HMGB2P26583 209 aaKnown RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 LSP1P33241 339 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PSMC4P43686 418 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PIP4K2AP48426 406 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 EPHB4P54760 987 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 RPS26P62854 115 aaKnown RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 YBX1P67809 324 aaKnown RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ATP8B2P98198 1209 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 TEFQ10587 303 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 RASA3Q14644 834 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms