RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CACNG4Q9UBN1 327 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 SEPT9Q9UHD8 586 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 PRG3Q9Y2Y8 225 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-204ENST00000477429 CLUHO75153 1309 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 IGSF10Q6WRI0 2623 aa10.99□□□□□ -0.65
COL4A5-204ENST00000477429 FANCMQ8IYD8 2048 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 ESYT2A0FGR8 921 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 ANHXE9PGG2 379 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 TDP2O95551 362 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 SRFP11831 508 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 RPL17P18621 184 aaKnown RBP10.98□□□□□ -0.65
COL4A5-204ENST00000477429 AK2P54819 239 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 NPEPPSP55786 919 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 NTHL1P78549 312 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 SETQ01105 290 aaPredicted RBP10.98□□□□□ -0.65
COL4A5-204ENST00000477429 HTR4Q13639 388 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 GIT2Q14161 759 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 MRPL10Q7Z7H8 261 aaKnown RBP10.98□□□□□ -0.65
COL4A5-204ENST00000477429 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 PALB2Q86YC2 1186 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 GLYCTKQ8IVS8 523 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 COLGALT2Q8IYK4 626 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
COL4A5-204ENST00000477429 TMEM87AQ8NBN3 555 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 CCDC136Q96JN2 1154 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 RPS6KC1Q96S38 1066 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 HERC2P3Q9BVR0 1158 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 EIF2AQ9BY44 585 aaKnown RBP10.98□□□□□ -0.65
COL4A5-204ENST00000477429 BMP2KQ9NSY1 1161 aaPredicted RBP10.98□□□□□ -0.65
COL4A5-204ENST00000477429 AGPAT5Q9NUQ2 364 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 HES2Q9Y543 173 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 MYO18BQ8IUG5 2567 aa10.98□□□□□ -0.65
COL4A5-204ENST00000477429 hCG_1984214I3L0E3 225 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 EML1O00423 815 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 MAFO75444 373 aaPredicted RBP10.97□□□□□ -0.65
COL4A5-204ENST00000477429 PAPLNO95428 1278 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 SOD2P04179 222 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 LAMP2P13473 410 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 GPC5P78333 572 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 NTRK3Q16288 839 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 TMEM132AQ24JP5 1023 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 LRCH2Q5VUJ6 765 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 PARM1Q6UWI2 310 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 SYNE3Q6ZMZ3 975 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 DHX32Q7L7V1 743 aaKnown RBP10.97□□□□□ -0.65
COL4A5-204ENST00000477429 CATSPER4Q7RTX7 472 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 C1orf210Q8IVY1 113 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 TEX2Q8IWB9 1127 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 ZNF713Q8N859 430 aaPredicted RBP10.97□□□□□ -0.65
COL4A5-204ENST00000477429 SMG7Q92540 1137 aaKnown RBP10.97□□□□□ -0.65
COL4A5-204ENST00000477429 FGF14Q92915 247 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 EMILIN2Q9BXX0 1053 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 GPR62Q9BZJ7 368 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 NT5C3AQ9H0P0 336 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 RSAD1Q9HA92 442 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 RXFP1Q9HBX9 757 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 ANO2Q9NQ90 1003 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 ARHGEF3Q9NR81 526 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 MRPL17Q9NRX2 175 aaKnown RBP10.97□□□□□ -0.65
COL4A5-204ENST00000477429 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 FAN1Q9Y2M0 1017 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 SIT1Q9Y3P8 196 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 NUMBLQ9Y6R0 609 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 HECTD1Q9ULT8 2610 aa10.97□□□□□ -0.65
COL4A5-204ENST00000477429 SHISA7A6NL88 538 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 DDX11L8A8MPP1 907 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 ZBTB39O15060 712 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 TGM5O43548 720 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 GAS7O60861 476 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 DTNBO60941 627 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 CD72P21854 359 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 TGM1P22735 817 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 SFPQP23246 707 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL4A5-204ENST00000477429 IGFBP6P24592 240 aaPredicted RBP10.96□□□□□ -0.65
COL4A5-204ENST00000477429 IRX6P78412 446 aaPredicted RBP10.96□□□□□ -0.65
COL4A5-204ENST00000477429 DSC1Q08554 894 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 BMS1Q14692 1282 aaKnown RBP10.96□□□□□ -0.65
COL4A5-204ENST00000477429 XKR3Q5GH77 459 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 PHLDB3Q6NSJ2 640 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 LILRA6Q6PI73 481 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 GET4Q7L5D6 327 aaPredicted RBP10.96□□□□□ -0.65
COL4A5-204ENST00000477429 MIER3Q7Z3K6 550 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 GSTCDQ8NEC7 633 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 PJA1Q8NG27 643 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 TMEM143Q96AN5 459 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 GAD1Q99259 594 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 RIT2Q99578 217 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 HINFPQ9BQA5 517 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 TEKT3Q9BXF9 490 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 CXCL16Q9H2A7 254 aa10.96□□□□□ -0.65
COL4A5-204ENST00000477429 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.65
COL4A5-204ENST00000477429 NRG2O14511 850 aaPredicted RBP10.95□□□□□ -0.66
COL4A5-204ENST00000477429 PRPF3O43395 683 aaKnown RBP10.95□□□□□ -0.66
COL4A5-204ENST00000477429 GLUD1P00367 558 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 ALDH2P05091 517 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 URODP06132 367 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 SRGAP2CP0DJJ0 459 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 MLH1P40692 756 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms