RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 USP14P54578 494 aa5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 LILRA3Q8N6C8 439 aaPredicted RBP5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 GPATCH11Q8N954 259 aa5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 IGSF22Q8N9C0 903 aa5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 CPPED1Q9BRF8 314 aaPredicted RBP5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 BOCQ9BWV1 1114 aa5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 SLC46A2Q9BY10 475 aa5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 ENKD1Q9H0I2 346 aa5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 EIF2B4Q9UI10 523 aaKnown RBP5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 EPN1Q9Y6I3 576 aaPredicted RBP5.35□□□□□ -1.55
PIKFYVE-209ENST00000477200 RSF1Q96T23 1441 aaPredicted RBP5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 UBA6A0AVT1 1052 aaPredicted RBP5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 MTSS1O43312 755 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 KRT37O76014 449 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 ITGB6P18564 788 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 GTF2F1P35269 517 aaKnown RBP eCLIP5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 RBM25P49756 843 aaKnown RBP5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 KIF11P52732 1056 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 ANAPC15P60006 121 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 TTC38Q5R3I4 469 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 CCDC62Q6P9F0 684 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 TMED8Q6PL24 325 aaPredicted RBP5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 CASC1Q6TDU7 716 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 FAM43BQ6ZT52 329 aaPredicted RBP5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 PDCL2Q8N4E4 241 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 MNS1Q8NEH6 495 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 NCAPGQ9BPX3 1015 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 CPEB1Q9BZB8 566 aaKnown RBP5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 CEP83Q9Y592 693 aa5.34□□□□□ -1.55
PIKFYVE-209ENST00000477200 TCRBV16S1A1N1A0A5B0 115 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 IGSF3O75054 1194 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 KCNJ4P48050 445 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 MECP2P51608 486 aaKnown RBP5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 MAP2K1Q02750 393 aaPredicted RBP5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 PRR16Q569H4 304 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 TRIM61Q5EBN2 209 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 PRAMEF9Q5VWM5 478 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 FGD2Q7Z6J4 655 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 ARHGEF19Q8IW93 802 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 FAM98AQ8NCA5 519 aaKnown RBP5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 OR52N2Q8NGI0 321 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 NDC1Q9BTX1 674 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 CCDC113Q9H0I3 377 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 RSAD1Q9HA92 442 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 DKK2Q9UBU2 259 aa5.33□□□□□ -1.56
PIKFYVE-209ENST00000477200 KDM2BQ8NHM5 1336 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 CCDC85CA6NKD9 419 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 NPTXRO95502 500 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 CCDC172P0C7W6 258 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 TCF3P15923 654 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 APOBEC3AP31941 199 aaPredicted RBP5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 BCAR1P56945 870 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 MYBPC3Q14896 1274 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 ZKSCAN8Q15776 578 aaPredicted RBP5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 VPS72Q15906 364 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 LONRF2Q1L5Z9 754 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 METTL24Q5JXM2 366 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 EPHA10Q5JZY3 1008 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 ZNF771Q7L3S4 317 aaPredicted RBP5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 CMTR2Q8IYT2 770 aaKnown RBP5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 LCORLQ8N3X6 602 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 MYRIPQ8NFW9 859 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 TUBGCP5Q96RT8 1024 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 SOX7Q9BT81 388 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 LSM14BQ9BX40 385 aaKnown RBP5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 ING3Q9NXR8 418 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 TERF2IPQ9NYB0 399 aa5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 NOL7Q9UMY1 257 aaKnown RBP5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.32□□□□□ -1.56
PIKFYVE-209ENST00000477200 VPS8Q8N3P4 1428 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 WDR97A6NE52 1622 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 SCRIBQ14160 1630 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 E9PSI1 815 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 NCR1O76036 304 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 FOXI1Q12951 378 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 OS9Q13438 667 aaPredicted RBP5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 NBPF5PQ86XG9 351 aaPredicted RBP5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 OTUD6BQ8N6M0 293 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 LINC00476Q8WZB0 136 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 PDCD2LQ9BRP1 358 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 PANK2Q9BZ23 570 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 PITHD1Q9GZP4 211 aaPredicted RBP5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 AKIP1Q9NQ31 210 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 TRPM5Q9NZQ8 1165 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 INSL6Q9Y581 213 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 NCOA2Q15596 1464 aa5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 BAZ1BQ9UIG0 1483 aaKnown RBP5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 RRBP1Q9P2E9 1410 aaKnown RBP5.31□□□□□ -1.56
PIKFYVE-209ENST00000477200 KTN1Q86UP2 1357 aaKnown RBP5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 KIF16BQ96L93 1317 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 MAPKBP1O60336 1514 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 A0A0A6YYJ9 748 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 GOLIM4O00461 696 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 DNAJC6O75061 913 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 NDUFA10O95299 355 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 PLA2G5P39877 138 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 SEC24CP53992 1094 aa5.3□□□□□ -1.56
PIKFYVE-209ENST00000477200 ARHGAP44Q17R89 818 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms