RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 A0A0B4J269 797 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 ABLIM1O14639 778 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 SEPT4O43236 478 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 WNT7BP56706 349 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 ZBED6P86452 979 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 ZNF200P98182 395 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 POP1Q99575 1024 aaKnown RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 ACO2Q99798 780 aaKnown RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 FDXACB1Q9BRP7 624 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 FAM213AQ9BRX8 229 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 NRCAMQ92823 1304 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 MBLAC1A4D2B0 266 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 B4GALT5O43286 388 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 LRRN2O75325 713 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 PRKCBP05771 671 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 TPM1P09493 284 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 C6orf222P0C671 652 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 NLRP11P59045 1033 aaKnown RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 NKX3-2P78367 333 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 RUFY4Q6ZNE9 571 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 TOGARAM2Q6ZUX3 1019 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 GPD1LQ8N335 351 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 NEK11Q8NG66 645 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 PARD3BQ8TEW8 1205 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 NFKBIZQ9BYH8 718 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 AJAP1Q9UKB5 411 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-206ENST00000477085 AKT3Q9Y243 479 aa15.75■□□□□ 0.11
COL4A6-206ENST00000477085 GTPBP10A4D1E9 387 aaKnown RBP15.74■□□□□ 0.11
COL4A6-206ENST00000477085 RRN3P2A6NIE6 340 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 EXTL3O43909 919 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 FAM189A1O60320 539 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 ADAMTS4O75173 837 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 KCNJ6P48051 423 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 ACOT2P49753 483 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 POU5F1BQ06416 359 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 TFDP1Q14186 410 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 MAPK6Q16659 721 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 AMHR2Q16671 573 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 EXOC3L4Q17RC7 722 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 GNASQ5JWF2 1037 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 MAP3K21Q5TCX8 1036 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 ZPBP2Q6X784 338 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 IFNLR1Q8IU57 520 aaPredicted RBP15.74■□□□□ 0.11
COL4A6-206ENST00000477085 ZBTB8OSQ8IWT0 167 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 LMO3Q8TAP4 145 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 ZNF296Q8WUU4 475 aaPredicted RBP15.74■□□□□ 0.11
COL4A6-206ENST00000477085 CCDC127Q96BQ5 260 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 C2orf40Q9H1Z8 148 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 PTPRHQ9HD43 1115 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 KCND1Q9NSA2 647 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 ANKFY1Q9P2R3 1169 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 AGO2Q9UKV8 859 aaKnown RBP15.74■□□□□ 0.11
COL4A6-206ENST00000477085 THSD7BQ9C0I4 1608 aa15.74■□□□□ 0.11
COL4A6-206ENST00000477085 BRCA2P51587 3418 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 LRRIQ3A6PVS8 624 aaPredicted RBP15.73■□□□□ 0.11
COL4A6-206ENST00000477085 ACKR2O00590 384 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 ARHGAP6O43182 974 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 KRT13P13646 458 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 PROZP22891 400 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 GCLMP48507 274 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 GPC3P51654 580 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 POLR2FP61218 127 aaKnown RBP15.73■□□□□ 0.11
COL4A6-206ENST00000477085 MEA1Q16626 185 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 SEZ6Q53EL9 994 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 KLHDC7AQ5VTJ3 777 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 GBP6Q6ZN66 633 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 GPIHBP1Q8IV16 184 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
COL4A6-206ENST00000477085 FAM84AQ96KN4 292 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 MRPL4Q9BYD3 311 aaKnown RBP15.73■□□□□ 0.11
COL4A6-206ENST00000477085 CDHR5Q9HBB8 845 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 NLRC4Q9NPP4 1024 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 PLCB1Q9NQ66 1216 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 TOPORSQ9NS56 1045 aaPredicted RBP15.73■□□□□ 0.11
COL4A6-206ENST00000477085 TRMT1Q9NXH9 659 aaKnown RBP15.73■□□□□ 0.11
COL4A6-206ENST00000477085 HDAC6Q9UBN7 1215 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 EVPLQ92817 2033 aa15.73■□□□□ 0.11
COL4A6-206ENST00000477085 LRRC53A6NM62 1247 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 INO80B-WBP1J3KQ70 363 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TREHO43280 583 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TMOD1P28289 359 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 HOXC8P31273 242 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 HNRNPH3P31942 346 aaKnown RBP15.72■□□□□ 0.11
COL4A6-206ENST00000477085 CLCN1P35523 988 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 SLFN12LQ6IEE8 588 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 GJB7Q6PEY0 223 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 CXCL17Q6UXB2 119 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TSHZ1Q6ZSZ6 1077 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 RRAGAQ7L523 313 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 IQCDQ96DY2 449 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 NAA15Q9BXJ9 866 aaKnown RBP15.72■□□□□ 0.11
COL4A6-206ENST00000477085 EDEM3Q9BZQ6 932 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 INO80BQ9C086 356 aaPredicted RBP15.72■□□□□ 0.11
COL4A6-206ENST00000477085 ADAMTS10Q9H324 1103 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 GCNT4Q9P109 453 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 DNAH12Q6ZR08 3092 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms