RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 NXF3Q9H4D5 531 aaKnown RBP15.15■□□□□ 0.02
MSL3-213ENST00000476743 PDZD7Q9H5P4 517 aa15.15■□□□□ 0.02
MSL3-213ENST00000476743 POLD4Q9HCU8 107 aa15.15■□□□□ 0.02
MSL3-213ENST00000476743 ARHGAP28Q9P2N2 729 aa15.15■□□□□ 0.02
MSL3-213ENST00000476743 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
MSL3-213ENST00000476743 INPP5FQ9Y2H2 1132 aa15.15■□□□□ 0.02
MSL3-213ENST00000476743 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
MSL3-213ENST00000476743 TCF20Q9UGU0 1960 aaKnown RBP15.15■□□□□ 0.02
MSL3-213ENST00000476743 N4BP3O15049 544 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 GALTP07902 379 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 PLA2G4BP0C869 781 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 UBA7P41226 1012 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 NPTX2P47972 431 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 ALDH7A1P49419 539 aaKnown RBP15.14■□□□□ 0.01
MSL3-213ENST00000476743 KRT17Q04695 432 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 PRPF4BQ13523 1007 aaKnown RBP15.14■□□□□ 0.01
MSL3-213ENST00000476743 ZRSR1Q15695 479 aaKnown RBP15.14■□□□□ 0.01
MSL3-213ENST00000476743 ZNF280BQ86YH2 543 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 HACE1Q8IYU2 909 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 GSTCDQ8NEC7 633 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 KCNN1Q92952 543 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 CALML4Q96GE6 196 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 CDK5RAP3Q96JB5 506 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 USP28Q96RU2 1077 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 TMEM175Q9BSA9 504 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 KIFC3Q9BVG8 833 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 TRIM6Q9C030 488 aaPredicted RBP15.14■□□□□ 0.01
MSL3-213ENST00000476743 TMEM134Q9H6X4 195 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 BLOC1S4Q9NUP1 217 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 PUF60Q9UHX1 559 aaKnown RBP15.14■□□□□ 0.01
MSL3-213ENST00000476743 HES2Q9Y543 173 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 SRPRBQ9Y5M8 271 aaKnown RBP15.14■□□□□ 0.01
MSL3-213ENST00000476743 PHLPP2Q6ZVD8 1323 aa15.14■□□□□ 0.01
MSL3-213ENST00000476743 BDP1A6H8Y1 2624 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 ARL5CA6NH57 179 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 ZC3H11AO75152 810 aaKnown RBP eCLIP15.13■□□□□ 0.01
MSL3-213ENST00000476743 DDHD2O94830 711 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 NPTXRO95502 500 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 KCNA5P22460 613 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 GTF2F1P35269 517 aaKnown RBP eCLIP15.13■□□□□ 0.01
MSL3-213ENST00000476743 SLC11A1P49279 550 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 NASPP49321 788 aaPredicted RBP15.13■□□□□ 0.01
MSL3-213ENST00000476743 PEX3P56589 373 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 DSC1Q08554 894 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 DMP1Q13316 513 aaPredicted RBP15.13■□□□□ 0.01
MSL3-213ENST00000476743 ADAM15Q13444 863 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 SLC39A14Q15043 492 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 ARSHQ5FYA8 562 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 NT5DC1Q5TFE4 455 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 TMEM173Q86WV6 379 aaPredicted RBP15.13■□□□□ 0.01
MSL3-213ENST00000476743 CDR2LQ86X02 465 aaPredicted RBP15.13■□□□□ 0.01
MSL3-213ENST00000476743 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.13■□□□□ 0.01
MSL3-213ENST00000476743 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 SPIRE2Q8WWL2 714 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 IGSF21Q96ID5 467 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 GAD1Q99259 594 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 PLIN2Q99541 437 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 NGRNQ9NPE2 291 aaKnown RBP15.13■□□□□ 0.01
MSL3-213ENST00000476743 DNAJB4Q9UDY4 337 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 RBM19Q9Y4C8 960 aaKnown RBP15.13■□□□□ 0.01
MSL3-213ENST00000476743 PCDHGC5Q9Y5F6 944 aa15.13■□□□□ 0.01
MSL3-213ENST00000476743 FSD2A1L4K1 749 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 NT5C1B-RDH14C9J2C7 533 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 K7ERI5 159 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 PLS3P13797 630 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 PLCG1P19174 1290 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 MARCKSP29966 332 aaPredicted RBP15.12■□□□□ 0.01
MSL3-213ENST00000476743 MLH1P40692 756 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 RNASELQ05823 741 aaKnown RBP15.12■□□□□ 0.01
MSL3-213ENST00000476743 KARSQ15046 597 aaKnown RBP15.12■□□□□ 0.01
MSL3-213ENST00000476743 PUS10Q3MIT2 529 aaKnown RBP15.12■□□□□ 0.01
MSL3-213ENST00000476743 EEF1DP3Q658K8 133 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 USP49Q70CQ1 688 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 TAS1R3Q7RTX0 852 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 DDX53Q86TM3 631 aaKnown RBP15.12■□□□□ 0.01
MSL3-213ENST00000476743 COLGALT2Q8IYK4 626 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 BCL7CQ8WUZ0 217 aaPredicted RBP15.12■□□□□ 0.01
MSL3-213ENST00000476743 TMEM169Q96HH4 297 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 CDCA3Q99618 268 aaPredicted RBP15.12■□□□□ 0.01
MSL3-213ENST00000476743 TCF25Q9BQ70 676 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 MIOSQ9NXC5 875 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 CLDND1Q9NY35 253 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 TNFSF13BQ9Y275 285 aa15.12■□□□□ 0.01
MSL3-213ENST00000476743 CCDC169A6NNP5 214 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 TBX10O75333 385 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 CSPG5O95196 566 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 EFEMP2O95967 443 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 POMCP01189 267 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 SSBP05455 408 aaKnown RBP eCLIP15.11■□□□□ 0.01
MSL3-213ENST00000476743 NRIP1P48552 1158 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 KCNC3Q14003 757 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 DUSP6Q16828 381 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 DCAF4L1Q3SXM0 396 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 MICAL1Q8TDZ2 1067 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 RAD54LQ92698 747 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 EPSTI1Q96J88 318 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 MSLNLQ96KJ4 702 aa15.11■□□□□ 0.01
MSL3-213ENST00000476743 ZFP42Q96MM3 310 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms