RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 ACO1P21399 889 aaKnown RBP4.35□□□□□ -1.71
NPHP3-207ENST00000476742 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 ANAPC15P60006 121 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 ADAM8P78325 824 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 CCT2P78371 535 aaKnown RBP4.35□□□□□ -1.71
NPHP3-207ENST00000476742 SRSF2Q01130 221 aaKnown RBP4.35□□□□□ -1.71
NPHP3-207ENST00000476742 UBE3CQ15386 1083 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 C19orf54Q5BKX5 351 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 MUM1L1Q5H9M0 696 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 SYDE2Q5VT97 1194 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 PGM2L1Q6PCE3 622 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 BTNL9Q6UXG8 535 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 KCNK18Q7Z418 384 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 ANKRD35Q8N283 1001 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 SNX33Q8WV41 574 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 SSH1Q8WYL5 1049 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 ADOQ96SZ5 270 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 C1QTNF3Q9BXJ4 246 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 ACE2Q9BYF1 805 aaPredicted RBP4.35□□□□□ -1.71
NPHP3-207ENST00000476742 MKS1Q9NXB0 559 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 GPR45Q9Y5Y3 372 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 MRFAP1Q9Y605 127 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 RPTORQ8N122 1335 aa4.35□□□□□ -1.71
NPHP3-207ENST00000476742 LOC105371045A0A1W2PR82 267 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 TRIM75PA6NK02 468 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 CAPN14A8MX76 684 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 MFAP3LO75121 409 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 ZNF20P17024 532 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 CTSSP25774 331 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 HIBADHP31937 336 aaKnown RBP4.34□□□□□ -1.71
NPHP3-207ENST00000476742 EVA1CP58658 441 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 MTMR1Q13613 665 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 ADRM1Q16186 407 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 MBNL2Q5VZF2 373 aaKnown RBP4.34□□□□□ -1.71
NPHP3-207ENST00000476742 PDZD4Q76G19 769 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-207ENST00000476742 ZNF575Q86XF7 245 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 PALM2Q8IXS6 379 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 GSPT2Q8IYD1 628 aaKnown RBP4.34□□□□□ -1.71
NPHP3-207ENST00000476742 THEMISQ8N1K5 641 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-207ENST00000476742 GLB1L3Q8NCI6 653 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-207ENST00000476742 WWC2-AS2Q96NR7 200 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 ADI1Q9BV57 179 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 TRIM8Q9BZR9 551 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 GREM2Q9H772 168 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 TLR9Q9NR96 1032 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 HOMER2Q9NSB8 354 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 TRHDEQ9UKU6 1024 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 TSC22D4Q9Y3Q8 395 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 TESMINQ9Y4I5 508 aa4.34□□□□□ -1.71
NPHP3-207ENST00000476742 WASHC2CQ9Y4E1 1318 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 SHTN1A0MZ66 631 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 AKR1B10O60218 316 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 TMEM127O75204 238 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 KATNA1O75449 491 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 IPO13O94829 963 aaKnown RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 GASTP01350 101 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 MYBL2P10244 700 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 OSMP13725 252 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 GNAT2P19087 354 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 CASRP41180 1078 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 MTNR1BP49286 362 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 GZMKP49863 264 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 IGBP1P78318 339 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 ELAVL1Q15717 326 aaKnown RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 MAMDC4Q6UXC1 1216 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 ABHD15Q6UXT9 468 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 MSL3Q8N5Y2 521 aaKnown RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 C1orf162Q8NEQ5 155 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 GPR156Q8NFN8 814 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 TSPEARQ8WU66 669 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 ZNF480Q8WV37 535 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 RIN2Q8WYP3 895 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 MIEF2Q96C03 454 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 IL17RAQ96F46 866 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 ZNF512Q96ME7 567 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 RBM12Q9NTZ6 932 aaKnown RBP4.33□□□□□ -1.72
NPHP3-207ENST00000476742 HDAC5Q9UQL6 1122 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 GIT1Q9Y2X7 761 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 SH3BP1Q9Y3L3 701 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 SPEF1Q9Y4P9 236 aa4.33□□□□□ -1.72
NPHP3-207ENST00000476742 KLHL33A6NCF5 533 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-207ENST00000476742 MT-CO1P00395 513 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 AGXTP21549 392 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 CCND1P24385 295 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 ADSLP30566 484 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-207ENST00000476742 CRHR1P34998 444 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 IARSP41252 1262 aaKnown RBP4.32□□□□□ -1.72
NPHP3-207ENST00000476742 PER3P56645 1201 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 APBA1Q02410 837 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 MALLQ13021 153 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 CRHR2Q13324 411 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 ACAP2Q15057 778 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 Q6ZSN1 163 aa4.32□□□□□ -1.72
NPHP3-207ENST00000476742 APBB1IPQ7Z5R6 666 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-207ENST00000476742 ZNF808Q8N4W9 903 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-207ENST00000476742 GPATCH3Q96I76 525 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms