RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HOXA10P31260 410 aaPredicted RBP9.03□□□□□ -0.96
VAPB-205ENST00000476395 POLE2P56282 527 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 MXRA7P84157 204 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 ASIC2Q16515 512 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 KNOP1Q1ED39 458 aaKnown RBP9.03□□□□□ -0.96
VAPB-205ENST00000476395 Q4G0T1 1027 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 FOXB2Q5VYV0 432 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 CDC42EP5Q6NZY7 148 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 AADACL2Q6P093 401 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 OTUD6AQ7L8S5 288 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 DRAXINQ8NBI3 349 aaPredicted RBP9.03□□□□□ -0.96
VAPB-205ENST00000476395 UTP4Q969X6 686 aaKnown RBP9.03□□□□□ -0.96
VAPB-205ENST00000476395 ARHGEF26Q96DR7 871 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 CDK5RAP3Q96JB5 506 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 TSG101Q99816 390 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 ANO3Q9BYT9 981 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 TMEM165Q9HC07 324 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 FGFR1OP2Q9NVK5 253 aa9.03□□□□□ -0.96
VAPB-205ENST00000476395 CHCHD3Q9NX63 227 aaKnown RBP9.03□□□□□ -0.96
VAPB-205ENST00000476395 GNA14O95837 355 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 ADCY1Q08828 1119 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 ZNF568Q3ZCX4 644 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 CBWD6Q4V339 395 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 CBWD3Q5JTY5 395 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 CBWD5Q5RIA9 395 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 ZDHHC24Q6UX98 284 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 LRIG3Q6UXM1 1119 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 PIGWQ7Z7B1 504 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 ANKLE1Q8NAG6 615 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 TLCD1Q96CP7 247 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 RMDN2Q96LZ7 410 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.02□□□□□ -0.96
VAPB-205ENST00000476395 RANBP17Q9H2T7 1088 aaKnown RBP9.02□□□□□ -0.96
VAPB-205ENST00000476395 AZI2Q9H6S1 392 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 ZNF287Q9HBT7 754 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 HOMER3Q9NSC5 361 aa9.02□□□□□ -0.96
VAPB-205ENST00000476395 NCANO14594 1321 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 MSH4O15457 936 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 AHCYL1O43865 530 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 RPA1P27694 616 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 KIAA1755Q5JYT7 1200 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 ALKBH5Q6P6C2 394 aaKnown RBP9.02□□□□□ -0.97
VAPB-205ENST00000476395 ALG3Q92685 438 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 TMEM237Q96Q45 408 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 ARPC5LQ9BPX5 153 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
VAPB-205ENST00000476395 STRA6Q9BX79 667 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 NT5C3AQ9H0P0 336 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 TTC7AQ9ULT0 858 aaPredicted RBP9.02□□□□□ -0.97
VAPB-205ENST00000476395 KDM3AQ9Y4C1 1321 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 WDR81Q562E7 1941 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 A0A0A6YYK5 440 aaPredicted RBP9.02□□□□□ -0.97
VAPB-205ENST00000476395 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.97
VAPB-205ENST00000476395 SRRM3A6NNA2 597 aaPredicted RBP9.02□□□□□ -0.97
VAPB-205ENST00000476395 ATP2B4P23634 1241 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 MSH2P43246 934 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 KLRC3Q07444 240 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.97
VAPB-205ENST00000476395 RIPK1Q13546 671 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 CPNE8Q86YQ8 564 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 FITM2Q8N6M3 262 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 SUPT20HQ8NEM7 779 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 SUCLA2Q9P2R7 463 aaPredicted RBP9.02□□□□□ -0.97
VAPB-205ENST00000476395 SERPINB13Q9UIV8 391 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 GGA1Q9UJY5 639 aa9.02□□□□□ -0.97
VAPB-205ENST00000476395 AFPP02771 609 aaKnown RBP9.01□□□□□ -0.97
VAPB-205ENST00000476395 GTF2IP78347 998 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 ZC2HC1CQ53FD0 456 aaPredicted RBP9.01□□□□□ -0.97
VAPB-205ENST00000476395 TAX1BP1Q86VP1 789 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 EPS8L3Q8TE67 593 aaKnown RBP9.01□□□□□ -0.97
VAPB-205ENST00000476395 CRAMP1Q96RY5 1269 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 DBR1Q9UK59 544 aaKnown RBP9.01□□□□□ -0.97
VAPB-205ENST00000476395 PDXKO00764 312 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 PPFIA2O75334 1257 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 CAPN15O75808 1086 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 NR3C1P04150 777 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 PLCG2P16885 1265 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 GALCP54803 685 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 ARHGAP4P98171 946 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 TMEM62Q0P6H9 643 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 BIRC3Q13489 604 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 TNFAIP8L3Q5GJ75 292 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 MOXD1Q6UVY6 613 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 CCDC65Q8IXS2 484 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 RPUSD2Q8IZ73 545 aaKnown RBP9.01□□□□□ -0.97
VAPB-205ENST00000476395 ANKS4BQ8N8V4 417 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 HSD17B14Q9BPX1 270 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 RAB34Q9BZG1 259 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 DMAC2Q9NW81 257 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 DLGAP2Q9P1A6 1054 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 SFI1A8K8P3 1242 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 CLIC2O15247 247 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 SESN3P58005 492 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 MGAT5Q09328 741 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 PLS1Q14651 629 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 RPS6KA1Q15418 735 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 C1orf220Q5T0J3 134 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms