RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 GTF2BQ00403 316 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 UBXN11Q5T124 520 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 ZNF720Q7Z2F6 126 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 RNF169Q8NCN4 708 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 PGBD4Q96DM1 585 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 PDZD7Q9H5P4 517 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 TBC1D7Q9P0N9 293 aa32.47■■■□□ 2.79
HOXB3-208ENST00000476342 TTLL13PA6NNM8 815 aa32.46■■■□□ 2.79
HOXB3-208ENST00000476342 DGKIO75912 1065 aa32.46■■■□□ 2.79
HOXB3-208ENST00000476342 NT5DC1Q5TFE4 455 aa32.46■■■□□ 2.79
HOXB3-208ENST00000476342 APBB1IPQ7Z5R6 666 aaPredicted RBP32.46■■■□□ 2.79
HOXB3-208ENST00000476342 ZNF598Q86UK7 904 aaKnown RBP32.46■■■□□ 2.79
HOXB3-208ENST00000476342 CDR2LQ86X02 465 aaPredicted RBP32.46■■■□□ 2.79
HOXB3-208ENST00000476342 HVCN1Q96D96 273 aa32.46■■■□□ 2.79
HOXB3-208ENST00000476342 ACO2Q99798 780 aaKnown RBP32.46■■■□□ 2.79
HOXB3-208ENST00000476342 TBX20Q9UMR3 447 aa32.46■■■□□ 2.79
HOXB3-208ENST00000476342 ALCAMQ13740 583 aa32.45■■■□□ 2.79
HOXB3-208ENST00000476342 HACE1Q8IYU2 909 aa32.45■■■□□ 2.79
HOXB3-208ENST00000476342 BICD1Q96G01 975 aa32.45■■■□□ 2.79
HOXB3-208ENST00000476342 TIGD1Q96MW7 591 aa32.45■■■□□ 2.79
HOXB3-208ENST00000476342 EIF2AQ9BY44 585 aaKnown RBP32.45■■■□□ 2.79
HOXB3-208ENST00000476342 TNFSF13BQ9Y275 285 aa32.45■■■□□ 2.79
HOXB3-208ENST00000476342 USP20Q9Y2K6 914 aa32.45■■■□□ 2.79
HOXB3-208ENST00000476342 GCNT3O95395 438 aa32.44■■■□□ 2.78
HOXB3-208ENST00000476342 NPTXRO95502 500 aa32.44■■■□□ 2.78
HOXB3-208ENST00000476342 ATF7P17544 494 aaPredicted RBP32.44■■■□□ 2.78
HOXB3-208ENST00000476342 STXBP4Q6ZWJ1 553 aa32.44■■■□□ 2.78
HOXB3-208ENST00000476342 TIFAQ96CG3 184 aa32.44■■■□□ 2.78
HOXB3-208ENST00000476342 TARS2Q9BW92 718 aaKnown RBP32.44■■■□□ 2.78
HOXB3-208ENST00000476342 YBX2Q9Y2T7 364 aaKnown RBP32.44■■■□□ 2.78
HOXB3-208ENST00000476342 PCDHB13Q9Y5F0 798 aa32.44■■■□□ 2.78
HOXB3-208ENST00000476342 KINO60870 393 aaKnown RBP32.43■■■□□ 2.78
HOXB3-208ENST00000476342 NR1I2O75469 434 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 MYOGP15173 224 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 DCAF4L1Q3SXM0 396 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 FAM26FQ5R3K3 315 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 ZPBP2Q6X784 338 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 MAP4K3Q8IVH8 894 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 ZNF689Q96CS4 500 aaPredicted RBP32.43■■■□□ 2.78
HOXB3-208ENST00000476342 LRCH3Q96II8 777 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 RC3H2Q9HBD1 1191 aaKnown RBP32.43■■■□□ 2.78
HOXB3-208ENST00000476342 HOOK1Q9UJC3 728 aaKnown RBP32.43■■■□□ 2.78
HOXB3-208ENST00000476342 IPPQ9Y573 584 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 COL4A6Q14031 1691 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 GOLGA6L22H0YM25 854 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 CA3P07451 260 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 ZC2HC1CQ53FD0 456 aaPredicted RBP32.43■■■□□ 2.78
HOXB3-208ENST00000476342 MRPL10Q7Z7H8 261 aaKnown RBP32.43■■■□□ 2.78
HOXB3-208ENST00000476342 ABI1Q8IZP0 508 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 CCDC47Q96A33 483 aaKnown RBP32.43■■■□□ 2.78
HOXB3-208ENST00000476342 NKX2-4Q9H2Z4 354 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 SLC28A3Q9HAS3 691 aa32.43■■■□□ 2.78
HOXB3-208ENST00000476342 FNDC1Q4ZHG4 1894 aaPredicted RBP32.42■■■□□ 2.78
HOXB3-208ENST00000476342 HNRNPDLO14979 420 aaKnown RBP32.42■■■□□ 2.78
HOXB3-208ENST00000476342 PPP1R37O75864 691 aa32.42■■■□□ 2.78
HOXB3-208ENST00000476342 POSTNQ15063 836 aa32.42■■■□□ 2.78
HOXB3-208ENST00000476342 SP7Q8TDD2 431 aaPredicted RBP32.42■■■□□ 2.78
HOXB3-208ENST00000476342 RSPH1Q8WYR4 309 aa32.42■■■□□ 2.78
HOXB3-208ENST00000476342 EXOC1Q9NV70 894 aa32.42■■■□□ 2.78
HOXB3-208ENST00000476342 TMEM265A0A087WTH1 108 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 TOM1L1O75674 476 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 FGFR1P11362 822 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 LIG4P49917 911 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 EHHADHQ08426 723 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 ZNF568Q3ZCX4 644 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 EEF1DP3Q658K8 133 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 GPR153Q6NV75 609 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 MPZL3Q6UWV2 235 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 CMTR2Q8IYT2 770 aaKnown RBP32.41■■■□□ 2.78
HOXB3-208ENST00000476342 SMG8Q8ND04 991 aaKnown RBP32.41■■■□□ 2.78
HOXB3-208ENST00000476342 TCHPQ9BT92 498 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 STRA6Q9BX79 667 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 UBN1Q9NPG3 1134 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 EXOC7Q9UPT5 735 aa32.41■■■□□ 2.78
HOXB3-208ENST00000476342 KLRC4O43908 158 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 PIGRP01833 764 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 PRR29P0C7W0 189 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 MYBP10242 640 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 ITGA4P13612 1032 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 FXR1P51114 621 aaKnown RBP eCLIP32.4■■■□□ 2.78
HOXB3-208ENST00000476342 DPYDQ12882 1025 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 BTG3Q14201 252 aaPredicted RBP32.4■■■□□ 2.78
HOXB3-208ENST00000476342 L1TD1Q5T7N2 865 aaKnown RBP32.4■■■□□ 2.78
HOXB3-208ENST00000476342 PPP2R2DQ66LE6 453 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 LPPQ93052 612 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 TMEM117Q9H0C3 514 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 NXF3Q9H4D5 531 aaKnown RBP32.4■■■□□ 2.78
HOXB3-208ENST00000476342 PTPRHQ9HD43 1115 aa32.4■■■□□ 2.78
HOXB3-208ENST00000476342 LCHNA4D1U4 455 aa32.39■■■□□ 2.78
HOXB3-208ENST00000476342 TBKBP1A7MCY6 615 aa32.39■■■□□ 2.78
HOXB3-208ENST00000476342 RPN1P04843 607 aaKnown RBP32.39■■■□□ 2.78
HOXB3-208ENST00000476342 PROZP22891 400 aa32.39■■■□□ 2.78
HOXB3-208ENST00000476342 CASP5P51878 434 aa32.39■■■□□ 2.78
HOXB3-208ENST00000476342 ACCSQ96QU6 501 aa32.39■■■□□ 2.78
HOXB3-208ENST00000476342 RSAD1Q9HA92 442 aa32.39■■■□□ 2.78
HOXB3-208ENST00000476342 ANKFY1Q9P2R3 1169 aa32.39■■■□□ 2.78
HOXB3-208ENST00000476342 KMT5BQ4FZB7 885 aa32.38■■■□□ 2.77
HOXB3-208ENST00000476342 PAN2Q504Q3 1202 aaKnown RBP32.38■■■□□ 2.77
HOXB3-208ENST00000476342 CLLU1OSQ5K130 101 aa32.38■■■□□ 2.77
HOXB3-208ENST00000476342 GLB1LQ6UWU2 654 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms