RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 LMCD1Q9NZU5 365 aa7.72□□□□□ -1.17
SHQ1-207ENST00000475558 TBC1D7Q9P0N9 293 aa7.72□□□□□ -1.17
SHQ1-207ENST00000475558 MYH6P13533 1939 aa7.72□□□□□ -1.17
SHQ1-207ENST00000475558 BRWD1Q9NSI6 2320 aa7.72□□□□□ -1.17
SHQ1-207ENST00000475558 TRANK1O15050 2925 aa7.72□□□□□ -1.17
SHQ1-207ENST00000475558 COL1A2P08123 1366 aa7.71□□□□□ -1.17
SHQ1-207ENST00000475558 MUC6Q6W4X9 2439 aa7.71□□□□□ -1.17
SHQ1-207ENST00000475558 H3BRB1 525 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 CETN3O15182 167 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 NRDCO43847 1150 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 SERPINC1P01008 464 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 BMP6P22004 513 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 POLGP54098 1239 aaPredicted RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 PURAQ00577 322 aaKnown RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 PRKCEQ02156 737 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TAP1Q03518 808 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 PTPN11Q06124 597 aaPredicted RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 ENPEPQ07075 957 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 ARHGAP1Q07960 439 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 NCBP1Q09161 790 aaKnown RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TBC1D8BQ0IIM8 1120 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TFDP1Q14186 410 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 ODR4Q5SWX8 454 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 ISM2Q6H9L7 571 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 SLFN12LQ6IEE8 588 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 Q6ZNB5 142 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 ANO5Q75V66 913 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 USP37Q86T82 979 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 LUZP1Q86V48 1076 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 HERC6Q8IVU3 1022 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 DHX40Q8IX18 779 aaKnown RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 FBXO16Q8IX29 292 aaPredicted RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 NME8Q8N427 588 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 RNF214Q8ND24 703 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 OR6J1Q8NGC5 347 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 MRFAP1L1Q96HT8 127 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 ACCSQ96QU6 501 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 REEP2Q9BRK0 252 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 MTG1Q9BT17 334 aaPredicted RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TRIM5Q9C035 493 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 C2orf40Q9H1Z8 148 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TUT1Q9H6E5 874 aaKnown RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 DHX33Q9H6R0 707 aaKnown RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 SLC39A2Q9NP94 309 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TRMT13Q9NUP7 481 aaKnown RBP7.71□□□□□ -1.18
SHQ1-207ENST00000475558 TRAF3IP3Q9Y228 551 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 NFE2L3Q9Y4A8 694 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 PCDHGA10Q9Y5H3 936 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 PCDHA2Q9Y5H9 948 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 NRCAMQ92823 1304 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 IGSF9BQ9UPX0 1349 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 REV3LO60673 3130 aa7.71□□□□□ -1.18
SHQ1-207ENST00000475558 SCN5AQ14524 2016 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 EPOPA6NHQ4 379 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 PI4K2BG5E9Z4 385 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 HIP1RO75146 1068 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 BAIAP3O94812 1187 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 STBD1O95210 358 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 MYL3P08590 195 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 IQCF3P0C7M6 154 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 PTGS1P23219 599 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 CDC25BP30305 580 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 KCNJ6P48051 423 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 UBASH3AP57075 661 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 GTF2BQ00403 316 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 BFSP2Q13515 415 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 NBPF20Q3BBV1 942 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 HSDL1Q3SXM5 330 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 FAM47CQ5HY64 1035 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 TMEM63BQ5T3F8 832 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 FAM102BQ5T8I3 360 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 SMYD5Q6GMV2 418 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 KLHL10Q6JEL2 608 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 NFRKBQ6P4R8 1299 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 NYAP1Q6ZVC0 841 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 LAPTM4BQ86VI4 370 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 CCDC60Q8IWA6 550 aaPredicted RBP7.7□□□□□ -1.18
SHQ1-207ENST00000475558 SYCP3Q8IZU3 236 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 CSGALNACT2Q8N6G5 542 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 AOPEPQ8N6M6 819 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 ERCC4Q92889 916 aaPredicted RBP7.7□□□□□ -1.18
SHQ1-207ENST00000475558 UIMC1Q96RL1 719 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 PPP1R9BQ96SB3 815 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 INO80BQ9C086 356 aaPredicted RBP7.7□□□□□ -1.18
SHQ1-207ENST00000475558 KIAA1586Q9HCI6 787 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 TYW1Q9NV66 732 aaKnown RBP7.7□□□□□ -1.18
SHQ1-207ENST00000475558 FANCLQ9NW38 375 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 IMPACTQ9P2X3 320 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 SEPT9Q9UHD8 586 aaPredicted RBP7.7□□□□□ -1.18
SHQ1-207ENST00000475558 XIRP2A4UGR9 3374 aa7.7□□□□□ -1.18
SHQ1-207ENST00000475558 LRRC37A2A6NM11 1700 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 TET1Q8NFU7 2136 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 IGKV6-21A0A0C4DH24 114 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 MAPK13O15264 365 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 ZNF862O60290 1169 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 ARIH2O95376 493 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 GCNT3O95395 438 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 PARNO95453 639 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms