RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ANO4Q32M45 955 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 ELOA2Q8IYF1 753 aaPredicted RBP8.7□□□□□ -1.02
SMC5-203ENST00000475540 TSPEARQ8WU66 669 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 EXTL1Q92935 676 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 IL17RAQ96F46 866 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 CDC5LQ99459 802 aaKnown RBP8.7□□□□□ -1.02
SMC5-203ENST00000475540 CCM2LQ9NUG4 571 aaPredicted RBP8.7□□□□□ -1.02
SMC5-203ENST00000475540 COL4A3BPQ9Y5P4 624 aa8.7□□□□□ -1.02
SMC5-203ENST00000475540 ALG1L2C9J202 215 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 AKR1B10O60218 316 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 STC2O76061 302 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 GASTP01350 101 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 CRHR2Q13324 411 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 MUM1L1Q5H9M0 696 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 C1orf210Q8IVY1 113 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
SMC5-203ENST00000475540 RIN2Q8WYP3 895 aaPredicted RBP8.69□□□□□ -1.02
SMC5-203ENST00000475540 PCDH12Q9NPG4 1184 aa8.69□□□□□ -1.02
SMC5-203ENST00000475540 CDKN1CP49918 316 aaPredicted RBP8.68□□□□□ -1.02
SMC5-203ENST00000475540 APBA1Q02410 837 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 ITKQ08881 620 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 MRPL49Q13405 166 aaKnown RBP8.68□□□□□ -1.02
SMC5-203ENST00000475540 ADRM1Q16186 407 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 GJC2Q5T442 439 aaPredicted RBP8.68□□□□□ -1.02
SMC5-203ENST00000475540 PGM2L1Q6PCE3 622 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 APBB1IPQ7Z5R6 666 aaPredicted RBP8.68□□□□□ -1.02
SMC5-203ENST00000475540 GPR156Q8NFN8 814 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 ST8SIA2Q92186 375 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 TRIM8Q9BZR9 551 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 GREM2Q9H772 168 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 HDAC5Q9UQL6 1122 aa8.68□□□□□ -1.02
SMC5-203ENST00000475540 KRTAP23-1A1A580 65 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 ANKRD62A6NC57 917 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 PLSCR1O15162 318 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 ITGA10O75578 1167 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 CFBP00751 764 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 IBSPP21815 317 aaPredicted RBP8.67□□□□□ -1.02
SMC5-203ENST00000475540 ADSLP30566 484 aaPredicted RBP8.67□□□□□ -1.02
SMC5-203ENST00000475540 MTNR1BP49286 362 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 CNGB1Q14028 1251 aaPredicted RBP8.67□□□□□ -1.02
SMC5-203ENST00000475540 FAM50AQ14320 339 aaKnown RBP8.67□□□□□ -1.02
SMC5-203ENST00000475540 CLUL1Q15846 466 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 PDZD4Q76G19 769 aaPredicted RBP8.67□□□□□ -1.02
SMC5-203ENST00000475540 FAM83AQ86UY5 434 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 MDGA1Q8NFP4 955 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 ATXN2LQ8WWM7 1075 aaKnown RBP8.67□□□□□ -1.02
SMC5-203ENST00000475540 CPPED1Q9BRF8 314 aaPredicted RBP8.67□□□□□ -1.02
SMC5-203ENST00000475540 GPRC5DQ9NZD1 345 aa8.67□□□□□ -1.02
SMC5-203ENST00000475540 MATN3O15232 486 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 OSMP13725 252 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 MAN2A2P49641 1150 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 EVA1CP58658 441 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 RRP1BQ14684 758 aaKnown RBP8.66□□□□□ -1.02
SMC5-203ENST00000475540 PTPROQ16827 1216 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 FAM214AQ32MH5 1076 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 SYDE2Q5VT97 1194 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 RNF207Q6ZRF8 634 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 MB21D1Q8N884 522 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 ZNF480Q8WV37 535 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 ADI1Q9BV57 179 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 GPR87Q9BY21 358 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 RBM12Q9NTZ6 932 aaKnown RBP8.66□□□□□ -1.02
SMC5-203ENST00000475540 GPR45Q9Y5Y3 372 aa8.66□□□□□ -1.02
SMC5-203ENST00000475540 TRIM75PA6NK02 468 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 GOLGA6L6A8MZA4 724 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 AMHP03971 560 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 HSP90B1P14625 803 aaKnown RBP8.65□□□□□ -1.02
SMC5-203ENST00000475540 CRHR1P34998 444 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 MALLQ13021 153 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 MTMR1Q13613 665 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 MBNL2Q5VZF2 373 aaKnown RBP8.65□□□□□ -1.02
SMC5-203ENST00000475540 Q6ZRM9 215 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 FAM177A1Q8N128 213 aaPredicted RBP8.65□□□□□ -1.02
SMC5-203ENST00000475540 IL17DQ8TAD2 202 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 PDCD2LQ9BRP1 358 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 MKS1Q9NXB0 559 aa8.65□□□□□ -1.02
SMC5-203ENST00000475540 XDHP47989 1333 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 GSPT1P15170 499 aaKnown RBP8.64□□□□□ -1.03
SMC5-203ENST00000475540 TNFRSF1AP19438 455 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 AGXTP21549 392 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 SCNN1GP51170 649 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 FOXE3Q13461 319 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 INAVAQ3KP66 663 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 TMPRSS6Q8IU80 811 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 MTMR8Q96EF0 704 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 MNTQ99583 582 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 PCDHGA2Q9Y5H1 932 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
SMC5-203ENST00000475540 ZMYM3Q14202 1370 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 KATNA1O75449 491 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 ECHS1P30084 290 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 PER3P56645 1201 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 LILRA3Q8N6C8 439 aaPredicted RBP8.63□□□□□ -1.03
SMC5-203ENST00000475540 C1orf162Q8NEQ5 155 aaPredicted RBP8.63□□□□□ -1.03
SMC5-203ENST00000475540 MDM1Q8TC05 714 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 SSH1Q8WYL5 1049 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 FAXDC2Q96IV6 333 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms