RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 CCDC66A2RUB6 948 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 TSPAN1O60635 241 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 CYP11B2P19099 503 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 HOXA11P31270 313 aaPredicted RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 CLCN6P51797 869 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 KRT17Q04695 432 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 CUL4AQ13619 759 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 PADI6Q6TGC4 694 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 KCNT2Q6UVM3 1135 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 LRRC55Q6ZSA7 311 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 UBN1Q9NPG3 1134 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 TLR9Q9NR96 1032 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 SPTBN5Q9NRC6 3674 aaKnown RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 PRRC2BQ5JSZ5 2229 aaKnown RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 A0A087WWV3 80 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 TNFRSF10AO00220 468 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 CSPG5O95196 566 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 PDCP20941 246 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 DNAJB1P25685 340 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 ALDH7A1P49419 539 aaKnown RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 MCCD1P59942 119 aaPredicted RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 ATP2C1P98194 919 aaPredicted RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 MBTD1Q05BQ5 628 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 HYAL1Q12794 435 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 CTC1Q2NKJ3 1217 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 NOMO2Q5JPE7 1267 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 MAEAQ7L5Y9 396 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 MRPL10Q7Z7H8 261 aaKnown RBP12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 ZBTB8OSQ8IWT0 167 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 MICAL1Q8TDZ2 1067 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 C2orf40Q9H1Z8 148 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 KANSL3Q9P2N6 904 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 HCSTQ9UBK5 93 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 KIAA1024Q9UPX6 916 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 FAM50BQ9Y247 325 aa12.72□□□□□ -0.37
HLA-DOB-208ENST00000475235 LRRIQ4A6NIV6 560 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 COQ9O75208 318 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 OFD1O75665 1012 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 IRS1P35568 1242 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 PPP2R5AQ15172 486 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 UBXN11Q5T124 520 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 APBB1IPQ7Z5R6 666 aaPredicted RBP12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 LPPQ93052 612 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 CDCA3Q99618 268 aaPredicted RBP12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 TRIM6Q9C030 488 aaPredicted RBP12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 CSRNP2Q9H175 543 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 RSAD1Q9HA92 442 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 NGRNQ9NPE2 291 aaKnown RBP12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 GPRC5CQ9NQ84 441 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 DDX19AQ9NUU7 478 aaKnown RBP12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 PRMT7Q9NVM4 692 aaPredicted RBP12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 DONSONQ9NYP3 566 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 DNM3Q9UQ16 869 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 EVPLQ92817 2033 aa12.71□□□□□ -0.38
HLA-DOB-208ENST00000475235 BMP15O95972 392 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 ITGA4P13612 1032 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 NAMPTP43490 491 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 BCAR1P56945 870 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 RNASELQ05823 741 aaKnown RBP12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 BMS1Q14692 1282 aaKnown RBP12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 AMHR2Q16671 573 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 AGMOQ6ZNB7 445 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 SLC39A11Q8N1S5 342 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 EFHBQ8N7U6 833 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 KIFAP3Q92845 792 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 TMEM169Q96HH4 297 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 IFT74Q96LB3 600 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 TBC1D13Q9NVG8 400 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 INPP5FQ9Y2H2 1132 aa12.7□□□□□ -0.38
HLA-DOB-208ENST00000475235 WDR81Q562E7 1941 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 H3BQ06 376 aaPredicted RBP12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 TULP2O00295 520 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 FSCN2O14926 492 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 EYA4O95677 639 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 ARF4P18085 180 aaPredicted RBP12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 PBX3P40426 434 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 ADAM15Q13444 863 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 IL17AQ16552 155 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 ECM1Q16610 540 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 FAM187BQ17R55 369 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 LONRF3Q496Y0 759 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 SLC27A1Q6PCB7 646 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms