RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 LYPLA2O95372 231 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 GALTP07902 379 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 SYT1P21579 422 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
VARS-223ENST00000474643 OR1G1P47890 313 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 SLC11A1P49279 550 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 RARRES1P49788 294 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
VARS-223ENST00000474643 PTENP60484 403 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 HAUS3Q68CZ6 603 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 ELMSAN1Q6PJG2 1045 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 TMEM184AQ6ZMB5 413 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 DDX53Q86TM3 631 aaKnown RBP16.75■□□□□ 0.27
VARS-223ENST00000474643 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 HSD17B14Q9BPX1 270 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 ZBP1Q9H171 429 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 IPPQ9Y573 584 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 ARID2Q68CP9 1835 aa16.75■□□□□ 0.27
VARS-223ENST00000474643 ARHGEF35A5YM69 484 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 LOC730098B7Z3J9 87 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 LAD1O00515 517 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 CLASP2O75122 1294 aaKnown RBP16.74■□□□□ 0.27
VARS-223ENST00000474643 URODP06132 367 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 CTSAP10619 480 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
VARS-223ENST00000474643 NCLP19338 710 aaKnown RBP16.74■□□□□ 0.27
VARS-223ENST00000474643 MLH1P40692 756 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 ITIH3Q06033 890 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 CAPSQ13938 189 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 RARS2Q5T160 578 aaKnown RBP16.74■□□□□ 0.27
VARS-223ENST00000474643 KIAA1841Q6NSI8 718 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 AGMOQ6ZNB7 445 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 CABP7Q86V35 215 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 PPFIBP1Q86W92 1011 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 SUGP1Q8IWZ8 645 aaKnown RBP16.74■□□□□ 0.27
VARS-223ENST00000474643 NECTIN4Q96NY8 510 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 NACC1Q96RE7 527 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 RPS6KC1Q96S38 1066 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 TMEM175Q9BSA9 504 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 CSRNP2Q9H175 543 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 TUFT1Q9NNX1 390 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 XPNPEP1Q9NQW7 623 aa16.74■□□□□ 0.27
VARS-223ENST00000474643 PRG3Q9Y2Y8 225 aaPredicted RBP16.74■□□□□ 0.27
VARS-223ENST00000474643 C2CD2LO14523 706 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 STX6O43752 255 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.278e-6■■□□□ 12.6
VARS-223ENST00000474643 LIG1P18858 919 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 KLRC2P26717 231 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 HOXA11P31270 313 aaPredicted RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 MTHFRP42898 656 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 MBTD1Q05BQ5 628 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 MRPL10Q7Z7H8 261 aaKnown RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 TMEM173Q86WV6 379 aaPredicted RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 ZNF280BQ86YH2 543 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 ASAP3Q8TDY4 903 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 EDAQ92838 391 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 EIF2AQ9BY44 585 aaKnown RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 MRPL17Q9NRX2 175 aaKnown RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 DBR1Q9UK59 544 aaKnown RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 SSX2IPQ9Y2D8 614 aa16.73■□□□□ 0.27
VARS-223ENST00000474643 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 ARIH1Q9Y4X5 557 aaPredicted RBP16.73■□□□□ 0.27
VARS-223ENST00000474643 A0A087WWV3 80 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 ARL5CA6NH57 179 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 NPTXRO95502 500 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 GLRA2P23416 452 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 ARL2P36404 184 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 ATAT1Q5SQI0 421 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 UBXN11Q5T124 520 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 SLC27A1Q6PCB7 646 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 SYCE2Q6PIF2 218 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 POTEGQ6S5H5 508 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 SUSD6Q92537 303 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 GAD1Q99259 594 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 ADPGKQ9BRR6 497 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 C2orf40Q9H1Z8 148 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 LRWD1Q9UFC0 647 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 PARP2Q9UGN5 583 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 HES2Q9Y543 173 aa16.72■□□□□ 0.27
VARS-223ENST00000474643 NRP1O14786 923 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 DDHD2O94830 711 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 ARF4P18085 180 aaPredicted RBP16.71■□□□□ 0.27
VARS-223ENST00000474643 CCT6AP40227 531 aaKnown RBP16.71■□□□□ 0.27
VARS-223ENST00000474643 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.272e-9■■■■■ 29.1
VARS-223ENST00000474643 SCNN1GP51170 649 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 KCNC3Q14003 757 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 HFE2Q6ZVN8 426 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 CATSPER3Q86XQ3 398 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 C4orf32Q8N8J7 132 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 DEPTORQ8TB45 409 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 PBXIP1Q96AQ6 731 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 IFT74Q96LB3 600 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 POLR3CQ9BUI4 534 aaPredicted RBP16.71■□□□□ 0.27
VARS-223ENST00000474643 COLEC11Q9BWP8 271 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 S1PR5Q9H228 398 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 ADAM7Q9H2U9 754 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms