RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ATP11BQ9Y2G3 1177 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 TRIM49BA6NDI0 452 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 ZNF233A6NK53 670 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 CLIC2O15247 247 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 SLC16A3O15427 465 aaKnown RBP11.3□□□□□ -0.6
COL12A1-206ENST00000474564 CTSHP09668 335 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 SKIP12755 728 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 SELPP16109 830 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 MBTD1Q05BQ5 628 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 CETN1Q12798 172 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 NFX1Q12986 1120 aaKnown RBP11.3□□□□□ -0.6
COL12A1-206ENST00000474564 PAK2Q13177 524 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 SNX17Q15036 470 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 IQCB1Q15051 598 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 SURF1Q15526 300 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 ZNF568Q3ZCX4 644 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 MPZL3Q6UWV2 235 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 TSHZ1Q6ZSZ6 1077 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 DHX40Q8IX18 779 aaKnown RBP11.3□□□□□ -0.6
COL12A1-206ENST00000474564 FAM126BQ8IXS8 530 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 GPD1LQ8N335 351 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 ACO2Q99798 780 aaKnown RBP11.3□□□□□ -0.6
COL12A1-206ENST00000474564 MKNK1Q9BUB5 465 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 TARS2Q9BW92 718 aaKnown RBP11.3□□□□□ -0.6
COL12A1-206ENST00000474564 CHST12Q9NRB3 414 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 TMEM39AQ9NV64 488 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 ANKFY1Q9P2R3 1169 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 ARMCX3Q9UH62 379 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-206ENST00000474564 AGO2Q9UKV8 859 aaKnown RBP11.3□□□□□ -0.6
COL12A1-206ENST00000474564 TNFSF13BQ9Y275 285 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 CNTNAP2Q9UHC6 1331 aa11.3□□□□□ -0.6
COL12A1-206ENST00000474564 KCNJ18B7U540 433 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 MAPK13O15264 365 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 MCF2P10911 925 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 CKBP12277 381 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 YARSP54577 528 aaKnown RBP11.29□□□□□ -0.6
COL12A1-206ENST00000474564 TLE2Q04725 743 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 KCNJ12Q14500 433 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 FKBP15Q5T1M5 1219 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 INTS8Q75QN2 995 aaKnown RBP11.29□□□□□ -0.6
COL12A1-206ENST00000474564 FRMD5Q7Z6J6 570 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 FAM186BQ8IYM0 893 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 TMEM174Q8WUU8 243 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 FNBP1Q96RU3 617 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 HTATIP2Q9BUP3 242 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 CCDC94Q9BW85 323 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-206ENST00000474564 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 CCDC113Q9H0I3 377 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 HSPBP1Q9NZL4 362 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 PIN4Q9Y237 131 aaKnown RBP11.29□□□□□ -0.6
COL12A1-206ENST00000474564 R3HCC1Q9Y3T6 440 aaKnown RBP11.29□□□□□ -0.6
COL12A1-206ENST00000474564 ADGRA3Q8IWK6 1321 aa11.29□□□□□ -0.6
COL12A1-206ENST00000474564 OGTO15294 1046 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 TGFB1I1O43294 461 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 EXTL3O43909 919 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 CD4P01730 458 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 CLTBP09497 229 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 COL6A1P12109 1028 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 UBASH3AP57075 661 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 POU5F1Q01860 360 aaKnown RBP11.28□□□□□ -0.6
COL12A1-206ENST00000474564 KCNA1Q09470 495 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 HIC1Q14526 733 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 NOLC1Q14978 699 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL12A1-206ENST00000474564 TRIM60Q495X7 471 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 ZCWPW2Q504Y3 356 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 TCP11X2Q5H9J9 407 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 ZNF618Q5T7W0 954 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 TCERG1LQ5VWI1 586 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
COL12A1-206ENST00000474564 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 LRRC8DQ7L1W4 858 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 ZBTB33Q86T24 672 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 CNOT6LQ96LI5 555 aaKnown RBP11.28□□□□□ -0.6
COL12A1-206ENST00000474564 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
COL12A1-206ENST00000474564 FTHL17Q9BXU8 183 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 HIPK3Q9H422 1215 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 TOPORSQ9NS56 1045 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-206ENST00000474564 ST3GAL5Q9UNP4 418 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL12A1-206ENST00000474564 STYXL1Q9Y6J8 313 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
COL12A1-206ENST00000474564 A0A0B4J269 797 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 A0A1B0GUA9 196 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 ANKRD63C9JTQ0 380 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 TSPAN1O60635 241 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 N4BP1O75113 896 aaKnown RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 ADCY5O95622 1261 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 CHRNA1P02708 482 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 CLTAP09496 248 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 HARSP12081 509 aaKnown RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 RFC2P35250 354 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 HOXD13P35453 343 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 RAB27AP51159 221 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms