RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 CEBPZQ03701 1054 aaKnown RBP22.27■■□□□ 1.16
HLA-B-252ENST00000474381 RNASELQ05823 741 aaKnown RBP22.27■■□□□ 1.16
HLA-B-252ENST00000474381 KARSQ15046 597 aaKnown RBP22.27■■□□□ 1.16
HLA-B-252ENST00000474381 SPIRE2Q8WWL2 714 aa22.27■■□□□ 1.16
HLA-B-252ENST00000474381 ZNF396Q96N95 335 aaPredicted RBP22.27■■□□□ 1.16
HLA-B-252ENST00000474381 KIFC3Q9BVG8 833 aa22.27■■□□□ 1.16
HLA-B-252ENST00000474381 NXF3Q9H4D5 531 aaKnown RBP22.27■■□□□ 1.16
HLA-B-252ENST00000474381 PDZD7Q9H5P4 517 aa22.27■■□□□ 1.16
HLA-B-252ENST00000474381 TMEM134Q9H6X4 195 aa22.27■■□□□ 1.16
HLA-B-252ENST00000474381 ODF2LQ9ULJ1 636 aa22.27■■□□□ 1.16
HLA-B-252ENST00000474381 GIT1Q9Y2X7 761 aa22.27■■□□□ 1.16
HLA-B-252ENST00000474381 ZC3H11AO75152 810 aaKnown RBP eCLIP22.26■■□□□ 1.15
HLA-B-252ENST00000474381 NPTXRO95502 500 aa22.26■■□□□ 1.15
HLA-B-252ENST00000474381 TXLNAP40222 546 aa22.26■■□□□ 1.15
HLA-B-252ENST00000474381 KRI1Q8N9T8 703 aaKnown RBP22.26■■□□□ 1.15
HLA-B-252ENST00000474381 PABPC5Q96DU9 382 aaKnown RBP22.26■■□□□ 1.15
HLA-B-252ENST00000474381 ADPGKQ9BRR6 497 aa22.26■■□□□ 1.15
HLA-B-252ENST00000474381 NRDE2Q9H7Z3 1164 aa22.26■■□□□ 1.15
HLA-B-252ENST00000474381 KMT5AQ9NQR1 393 aa22.26■■□□□ 1.15
HLA-B-252ENST00000474381 BLOC1S4Q9NUP1 217 aa22.26■■□□□ 1.15
HLA-B-252ENST00000474381 HES2Q9Y543 173 aa22.26■■□□□ 1.15
HLA-B-252ENST00000474381 ARL5CA6NH57 179 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 PLS3P13797 630 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 IRS1P35568 1242 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 PBX3P40426 434 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 TFF2Q03403 129 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 HYAL1Q12794 435 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 TMEM132AQ24JP5 1023 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 ARSHQ5FYA8 562 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 CDR2LQ86X02 465 aaPredicted RBP22.25■■□□□ 1.15
HLA-B-252ENST00000474381 LINC00301Q8NCQ3 95 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 RAD54LQ92698 747 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 EPSTI1Q96J88 318 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 RNF39Q9H2S5 420 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 LARSQ9P2J5 1176 aaKnown RBP22.25■■□□□ 1.15
HLA-B-252ENST00000474381 STK17AQ9UEE5 414 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 CCDC39Q9UFE4 941 aa22.25■■□□□ 1.15
HLA-B-252ENST00000474381 SPTBN5Q9NRC6 3674 aaKnown RBP22.24■■□□□ 1.15
HLA-B-252ENST00000474381 FSD2A1L4K1 749 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 TTLL13PA6NNM8 815 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 YEATS4O95619 227 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 F13A1P00488 732 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 GALTP07902 379 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 LIG1P18858 919 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 DDIT3P35638 169 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 SMTNP53814 917 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 RAD51AP2Q09MP3 1159 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 CTC1Q2NKJ3 1217 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 DCAF4L1Q3SXM0 396 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 USP49Q70CQ1 688 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 APBB1IPQ7Z5R6 666 aaPredicted RBP22.24■■□□□ 1.15
HLA-B-252ENST00000474381 GPBP1Q86WP2 473 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 LRRC15Q8TF66 581 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 LARP4BQ92615 738 aaKnown RBP22.24■■□□□ 1.15
HLA-B-252ENST00000474381 TMEM169Q96HH4 297 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 CLIC6Q96NY7 704 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 TMEM175Q9BSA9 504 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 NGRNQ9NPE2 291 aaKnown RBP22.24■■□□□ 1.15
HLA-B-252ENST00000474381 STK39Q9UEW8 545 aa22.24■■□□□ 1.15
HLA-B-252ENST00000474381 FSCN2O14926 492 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 PPP6R2O75170 966 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 EDN1P05305 212 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 SCP2P22307 547 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 MLH1P40692 756 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 AFF1P51825 1210 aaKnown RBP22.23■■□□□ 1.15
HLA-B-252ENST00000474381 ERVFC1P60507 584 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 STK38Q15208 465 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 NT5DC1Q5TFE4 455 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 ATF7IP2Q5U623 682 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 ATL3Q6DD88 541 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 ZNF280BQ86YH2 543 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 MICAL1Q8TDZ2 1067 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 KCNN1Q92952 543 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 FAM193BQ96PV7 902 aaPredicted RBP22.23■■□□□ 1.15
HLA-B-252ENST00000474381 GAD1Q99259 594 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 APOL6Q9BWW8 343 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 MRPL4Q9BYD3 311 aaKnown RBP22.23■■□□□ 1.15
HLA-B-252ENST00000474381 TNFSF13BQ9Y275 285 aa22.23■■□□□ 1.15
HLA-B-252ENST00000474381 SFI1A8K8P3 1242 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 H0YCG3 227 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 DDHD2O94830 711 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 POMCP01189 267 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 SLC11A1P49279 550 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 DSC1Q08554 894 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 MCM6Q14566 821 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 LEXMQ3ZCV2 418 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 SPECC1Q5M775 1068 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 TMEM161BQ8NDZ6 487 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 IGSF21Q96ID5 467 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 ZFP42Q96MM3 310 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 CDCA3Q99618 268 aaPredicted RBP22.22■■□□□ 1.15
HLA-B-252ENST00000474381 REEP2Q9BRK0 252 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 COL25A1Q9BXS0 654 aaPredicted RBP22.22■■□□□ 1.15
HLA-B-252ENST00000474381 GBP3Q9H0R5 595 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 DNAJB4Q9UDY4 337 aa22.22■■□□□ 1.15
HLA-B-252ENST00000474381 NT5C1B-RDH14C9J2C7 533 aa22.21■■□□□ 1.15
HLA-B-252ENST00000474381 SPTLC2O15270 562 aa22.21■■□□□ 1.15
HLA-B-252ENST00000474381 SLC16A4O15374 487 aa22.21■■□□□ 1.15
HLA-B-252ENST00000474381 B4GALT3O60512 393 aa22.21■■□□□ 1.15
HLA-B-252ENST00000474381 CSPG5O95196 566 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms