RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RSAD1Q9HA92 442 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 KMT5AQ9NQR1 393 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 TBC1D13Q9NVG8 400 aa20.88■□□□□ 0.93
PTCD3-210ENST00000473829 PHLPP2Q6ZVD8 1323 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 SLC16A4O15374 487 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 ITGA4P13612 1032 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 PLS3P13797 630 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 PTPROQ16827 1216 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 NT5DC1Q5TFE4 455 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 APOL6Q9BWW8 343 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 MRPL9Q9BYD2 267 aaKnown RBP20.87■□□□□ 0.93
PTCD3-210ENST00000473829 C17orf75Q9HAS0 396 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 PCDHB12Q9Y5F1 795 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 VCANP13611 3396 aa20.87■□□□□ 0.93
PTCD3-210ENST00000473829 TDRD15B5MCY1 1934 aaKnown RBP20.86■□□□□ 0.93
PTCD3-210ENST00000473829 FGF18O76093 207 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 KCNT2Q6UVM3 1135 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 THNSL1Q8IYQ7 743 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 SLC17A8Q8NDX2 589 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 CNNM3Q8NE01 707 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 POF1BQ8WVV4 589 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 ZNF558Q96NG5 402 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 TRIM6Q9C030 488 aaPredicted RBP20.86■□□□□ 0.93
PTCD3-210ENST00000473829 LMAN2LQ9H0V9 348 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 NRDE2Q9H7Z3 1164 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 AAASQ9NRG9 546 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 STK17AQ9UEE5 414 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 CCDC39Q9UFE4 941 aa20.86■□□□□ 0.93
PTCD3-210ENST00000473829 A0A0C4DFX4 3053 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 K7ERI5 159 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 N4BP3O15049 544 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 AKAP5P24588 427 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 IRS1P35568 1242 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 DDIT3P35638 169 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 TXLNAP40222 546 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 MLH1P40692 756 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 GIT2Q14161 759 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 SKIV2LQ15477 1246 aaKnown RBP20.85■□□□□ 0.93
PTCD3-210ENST00000473829 TIGD5Q53EQ6 642 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 RRAGBQ5VZM2 374 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 SHC4Q6S5L8 630 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 ZNF280BQ86YH2 543 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 TMEM161BQ8NDZ6 487 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 SPIRE2Q8WWL2 714 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 ZFP42Q96MM3 310 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 GAD1Q99259 594 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 NTPCRQ9BSD7 190 aaKnown RBP20.85■□□□□ 0.93
PTCD3-210ENST00000473829 PANK2Q9BZ23 570 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 TMEM134Q9H6X4 195 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 DNAJB4Q9UDY4 337 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 ODF2LQ9ULJ1 636 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 PCDHGC5Q9Y5F6 944 aa20.85■□□□□ 0.93
PTCD3-210ENST00000473829 ARL5CA6NH57 179 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 NT5C1B-RDH14C9J2C7 533 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 INPPL1O15357 1258 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 ZC3H11AO75152 810 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTCD3-210ENST00000473829 POMCP01189 267 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 ZNF131P52739 623 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 BCAR1P56945 870 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 BECN1Q14457 450 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 TMEM132AQ24JP5 1023 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 TCEAL5Q5H9L2 206 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 AXDND1Q5T1B0 1012 aaPredicted RBP20.84■□□□□ 0.93
PTCD3-210ENST00000473829 TMEM173Q86WV6 379 aaPredicted RBP20.84■□□□□ 0.93
PTCD3-210ENST00000473829 SLC39A11Q8N1S5 342 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 RSPH1Q8WYR4 309 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 GBP3Q9H0R5 595 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 MIOSQ9NXC5 875 aa20.84■□□□□ 0.93
PTCD3-210ENST00000473829 BRWD1Q9NSI6 2320 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 CUTAO60888 179 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 DDHD2O94830 711 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 MAPTP10636 758 aaKnown RBP20.83■□□□□ 0.93
PTCD3-210ENST00000473829 NCKAP1LP55160 1127 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 RNASELQ05823 741 aaKnown RBP20.83■□□□□ 0.93
PTCD3-210ENST00000473829 CSPP1Q1MSJ5 1256 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 ATF7IP2Q5U623 682 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 ATL3Q6DD88 541 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 PDILTQ8N807 584 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 GSTCDQ8NEC7 633 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 URGCPQ8TCY9 931 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 KCNG4Q8TDN1 519 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 BCL7CQ8WUZ0 217 aaPredicted RBP20.83■□□□□ 0.93
PTCD3-210ENST00000473829 NSUN3Q9H649 340 aaKnown RBP20.83■□□□□ 0.93
PTCD3-210ENST00000473829 KLK14Q9P0G3 267 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 THEGQ9P2T0 379 aa20.83■□□□□ 0.93
PTCD3-210ENST00000473829 RBM19Q9Y4C8 960 aaKnown RBP20.83■□□□□ 0.93
PTCD3-210ENST00000473829 TCHHQ07283 1943 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 FAM13AO94988 1023 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 KRT18P05783 430 aaKnown RBP20.82■□□□□ 0.92
PTCD3-210ENST00000473829 STAT6P42226 847 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 SLC11A1P49279 550 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 SCNN1GP51170 649 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 PLCB3Q01970 1234 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 DYMQ7RTS9 669 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 ADGRD2Q7Z7M1 963 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 FIZ1Q96SL8 496 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 ACO2Q99798 780 aaKnown RBP20.82■□□□□ 0.92
PTCD3-210ENST00000473829 TARS2Q9BW92 718 aaKnown RBP20.82■□□□□ 0.92
PTCD3-210ENST00000473829 CXCL16Q9H2A7 254 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 PTPRHQ9HD43 1115 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms