RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 LINC00301Q8NCQ3 95 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 CDK5RAP3Q96JB5 506 aa19.99■□□□□ 0.79
SNX4-204ENST00000473417 NGRNQ9NPE2 291 aaKnown RBP19.99■□□□□ 0.79
SNX4-204ENST00000473417 ARIH1Q9Y4X5 557 aaPredicted RBP19.99■□□□□ 0.79
SNX4-204ENST00000473417 HIDE1A8MVS5 230 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 HOXA11P31270 313 aaPredicted RBP19.98■□□□□ 0.79
SNX4-204ENST00000473417 DNM1Q05193 864 aaKnown RBP19.98■□□□□ 0.79
SNX4-204ENST00000473417 MXD4Q14582 209 aaPredicted RBP19.98■□□□□ 0.79
SNX4-204ENST00000473417 LONRF3Q496Y0 759 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 RASSF8Q8NHQ8 419 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 NT5C3AQ9H0P0 336 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 GPRC5CQ9NQ84 441 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 TBC1D13Q9NVG8 400 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 HCN4Q9Y3Q4 1203 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 PCDHB2Q9Y5E7 798 aa19.98■□□□□ 0.79
SNX4-204ENST00000473417 CARNS1A5YM72 827 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 SPTLC2O15270 562 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 ZC3H11AO75152 810 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNX4-204ENST00000473417 OFD1O75665 1012 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 CYP11B2P19099 503 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 ARL2P36404 184 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 PLA2G5P39877 138 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 ALDH7A1P49419 539 aaKnown RBP19.97■□□□□ 0.79
SNX4-204ENST00000473417 PTENP60484 403 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 KARSQ15046 597 aaKnown RBP19.97■□□□□ 0.79
SNX4-204ENST00000473417 PCBP1Q15365 356 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNX4-204ENST00000473417 NOMO2Q5JPE7 1267 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 UBXN11Q5T124 520 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 TMEM184AQ6ZMB5 413 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 AGMOQ6ZNB7 445 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 USP49Q70CQ1 688 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 MRPL10Q7Z7H8 261 aaKnown RBP19.97■□□□□ 0.79
SNX4-204ENST00000473417 IFNLR1Q8IU57 520 aaPredicted RBP19.97■□□□□ 0.79
SNX4-204ENST00000473417 KRI1Q8N9T8 703 aaKnown RBP19.97■□□□□ 0.79
SNX4-204ENST00000473417 ASAP3Q8TDY4 903 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 PGBD4Q96DM1 585 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 CALML4Q96GE6 196 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 EPSTI1Q96J88 318 aa19.97■□□□□ 0.79
SNX4-204ENST00000473417 POLR3FQ9H1D9 316 aaPredicted RBP19.97■□□□□ 0.79
SNX4-204ENST00000473417 FAM86C2PA6NEL3 165 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 NT5C1B-RDH14C9J2C7 533 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 ERLIN2O94905 339 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 YEATS4O95619 227 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 SSBP05455 408 aaKnown RBP eCLIP19.96■□□□□ 0.79
SNX4-204ENST00000473417 POU5F1BQ06416 359 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 CAPSQ13938 189 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 TMEM119Q4V9L6 283 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 TMC7Q7Z402 723 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 TMEM173Q86WV6 379 aaPredicted RBP19.96■□□□□ 0.79
SNX4-204ENST00000473417 MCPH1Q8NEM0 835 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 TMEM169Q96HH4 297 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 CHAMP1Q96JM3 812 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 NRDE2Q9H7Z3 1164 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 POLD4Q9HCU8 107 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 INPP5FQ9Y2H2 1132 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 USP15Q9Y4E8 981 aaPredicted RBP19.96■□□□□ 0.79
SNX4-204ENST00000473417 MORC2Q9Y6X9 1032 aaPredicted RBP19.96■□□□□ 0.79
SNX4-204ENST00000473417 DENND4AQ7Z401 1863 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 CNTNAP2Q9UHC6 1331 aa19.96■□□□□ 0.79
SNX4-204ENST00000473417 DCXO43602 365 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 TSPAN1O60635 241 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 SRGAP2BP0DMP2 458 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 GLRA2P23416 452 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 TFDP1Q14186 410 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 SMC1AQ14683 1233 aaKnown RBP19.95■□□□□ 0.78
SNX4-204ENST00000473417 ATL3Q6DD88 541 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 FAM122AQ96E09 287 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 CCSER1Q9C0I3 900 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 RSAD1Q9HA92 442 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 DNAJB4Q9UDY4 337 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 CFAP45Q9UL16 551 aa19.95■□□□□ 0.78
SNX4-204ENST00000473417 C2orf71A6NGG8 1288 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 PRR33A8MZF0 331 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 SLC26A4O43511 780 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 B4GALT3O60512 393 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 PPP6R2O75170 966 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 NCLP19338 710 aaKnown RBP19.94■□□□□ 0.78
SNX4-204ENST00000473417 AXLP30530 894 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 RNASELQ05823 741 aaKnown RBP19.94■□□□□ 0.78
SNX4-204ENST00000473417 MBTD1Q05BQ5 628 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 AMHR2Q16671 573 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 KCTD17Q8N5Z5 321 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 MRPL43Q8N983 215 aaKnown RBP19.94■□□□□ 0.78
SNX4-204ENST00000473417 CCDC51Q96ER9 411 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 IGSF21Q96ID5 467 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 RUSC1Q9BVN2 902 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 NFKBIZQ9BYH8 718 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 ZBP1Q9H171 429 aa19.94■□□□□ 0.78
SNX4-204ENST00000473417 PLXNA3P51805 1871 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 GALTP07902 379 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 PLA2G4BP0C869 781 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 PLCG1P19174 1290 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 ANP32AP39687 249 aaKnown RBP19.93■□□□□ 0.78
SNX4-204ENST00000473417 DHX8Q14562 1220 aaKnown RBP19.93■□□□□ 0.78
SNX4-204ENST00000473417 RINT1Q6NUQ1 792 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 ANKRD54Q6NXT1 300 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 NOTUMQ6P988 496 aa19.93■□□□□ 0.78
SNX4-204ENST00000473417 SYT2Q8N9I0 419 aaPredicted RBP19.93■□□□□ 0.78
SNX4-204ENST00000473417 SMG8Q8ND04 991 aaKnown RBP19.93■□□□□ 0.78
SNX4-204ENST00000473417 CNNM3Q8NE01 707 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms