RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ZNF365Q70YC5 407 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 C16orf59Q7L2K0 433 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 ZNF410Q86VK4 478 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 RPUSD2Q8IZ73 545 aaKnown RBP10.06□□□□□ -0.8
SMC4-214ENST00000472991 DAW1Q8N136 415 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 RNF149Q8NC42 400 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 DBF4BQ8NFT6 615 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 BSNDQ8WZ55 320 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 IFIH1Q9BYX4 1025 aaKnown RBP10.06□□□□□ -0.8
SMC4-214ENST00000472991 GOLPH3LQ9H4A5 285 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 AGO3Q9H9G7 860 aaKnown RBP10.06□□□□□ -0.8
SMC4-214ENST00000472991 KCNH3Q9ULD8 1083 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 NOC2LQ9Y3T9 749 aaKnown RBP10.06□□□□□ -0.8
SMC4-214ENST00000472991 PDCD11Q14690 1871 aaKnown RBP10.06□□□□□ -0.8
SMC4-214ENST00000472991 RANBP2P49792 3224 aaKnown RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 RALGAPA2Q2PPJ7 1873 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 LRRIQ4A6NIV6 560 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 POLR2DO15514 142 aaKnown RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 ASAP2O43150 1006 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 CSDE1O75534 798 aaKnown RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 ADH1CP00326 375 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 FGBP02675 491 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 FGFR4P22455 802 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 BMP8BP34820 402 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 CDC42EP1Q00587 391 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 PAK2Q13177 524 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 TFDP1Q14186 410 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 PLEKHG4Q58EX7 1191 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 ARSHQ5FYA8 562 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 CNKSR3Q6P9H4 555 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 SV2BQ7L1I2 683 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 OTOP2Q7RTS6 562 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 FAM228AQ86W67 206 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 SEPT8Q92599 483 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 STAMQ92783 540 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 KIFAP3Q92845 792 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 REEP2Q9BRK0 252 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 GCOM2Q9BZD3 368 aaPredicted RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 PRO3102Q9H379 93 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 IFT122Q9HBG6 1241 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 KCND2Q9NZV8 630 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 HPSEQ9Y251 543 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 SQORQ9Y6N5 450 aa10.05□□□□□ -0.8
SMC4-214ENST00000472991 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
SMC4-214ENST00000472991 ANK1P16157 1881 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 MYO9BQ13459 2157 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 GOLGA6L4A6NEF3 574 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 MYMKA6NI61 221 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
SMC4-214ENST00000472991 ACTN1P12814 892 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 TIMP2P16035 220 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 EIF4BP23588 611 aaKnown RBP10.04□□□□□ -0.8
SMC4-214ENST00000472991 NAMPTP43490 491 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 PHKA2P46019 1235 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 NDUFA8P51970 172 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 PTENP60484 403 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 PPP2R5AQ15172 486 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 SHHQ15465 462 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 DYMQ7RTS9 669 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 IQUBQ8NA54 791 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 USP38Q8NB14 1042 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 APBB2Q92870 758 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 RNPC3Q96LT9 517 aaKnown RBP10.04□□□□□ -0.8
SMC4-214ENST00000472991 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 TIPINQ9BVW5 301 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 KLF16Q9BXK1 252 aaPredicted RBP10.04□□□□□ -0.8
SMC4-214ENST00000472991 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 CUEDC2Q9H467 287 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 ERVK-5Q9HDB9 667 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 SERTAD1Q9UHV2 236 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 PADI3Q9ULW8 664 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 ADGRA3Q8IWK6 1321 aa10.04□□□□□ -0.8
SMC4-214ENST00000472991 INO80B-WBP1J3KQ70 363 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 GPR182O15218 404 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 GADD45BO75293 160 aaPredicted RBP10.03□□□□□ -0.8
SMC4-214ENST00000472991 TBCAO75347 108 aaKnown RBP10.03□□□□□ -0.8
SMC4-214ENST00000472991 BAIAP3O94812 1187 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 FAM13AO94988 1023 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 SFPQP23246 707 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMC4-214ENST00000472991 SYKP43405 635 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 PEX3P56589 373 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 DMP1Q13316 513 aaPredicted RBP10.03□□□□□ -0.8
SMC4-214ENST00000472991 GIT2Q14161 759 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 IKBKEQ14164 716 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 ODR4Q5SWX8 454 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms