RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ADAM17P78536 824 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 RBM10P98175 930 aaKnown RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 GRIN1Q05586 938 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 FAM160A1Q05DH4 1040 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 ORC2Q13416 577 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 ZSCAN23Q3MJ62 389 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 ARHGEF16Q5VV41 709 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 RESP18Q5W5W9 173 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 ADALQ6DHV7 355 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 MCTP2Q6DN12 878 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 FRMD5Q7Z6J6 570 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 FCHSD1Q86WN1 690 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 TMEM105Q8N8V8 129 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 IL31RAQ8NI17 732 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 ATP8B4Q8TF62 1192 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 LINC01599Q8WXQ3 324 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 P2RX5Q93086 422 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 RIPOR3Q96MK2 946 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 NUP62CLQ9H1M0 184 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 RNPEPQ9H4A4 650 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 CLSTN2Q9H4D0 955 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 BCAS3Q9H6U6 928 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 EHMT1Q9H9B1 1298 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 PXMP2Q9NR77 195 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 SETD4Q9NVD3 440 aa7.13□□□□□ -1.27
HDAC1-205ENST00000472928 SRPRBQ9Y5M8 271 aaKnown RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 MRPL42Q9Y6G3 142 aaKnown RBP7.13□□□□□ -1.27
HDAC1-205ENST00000472928 FASNP49327 2511 aaKnown RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 A0A1B0GVL5 298 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 MED19A0JLT2 244 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 SYCE3A1L190 88 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 VWA3AA6NCI4 1184 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 H3BRB1 525 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 LAD1O00515 517 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 ENPP3O14638 875 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 DGKIO75912 1065 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 LGALS2P05162 132 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 GHRP10912 638 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 GCFC2P16383 781 aaKnown RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 CMA1P23946 247 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 SREBF1P36956 1147 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 HSD17B4P51659 736 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 NDUFA8P51970 172 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 ARHGAP4P98171 946 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 GHRHRQ02643 423 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 MGAT3Q09327 533 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 BTG3Q14201 252 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 LPIN1Q14693 890 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 CALCRLQ16602 461 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 OCLNQ16625 522 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 SPECC1Q5M775 1068 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 SHC4Q6S5L8 630 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 LIAT1Q6ZQX7 453 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 RBM23Q86U06 439 aaKnown RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 MCF2L2Q86YR7 1114 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 TEX2Q8IWB9 1127 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 ADSSL1Q8N142 457 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 CRIPAKQ8N1N5 446 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 POF1BQ8WVV4 589 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 PPP2R3CQ969Q6 453 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 NAP1L4Q99733 375 aaKnown RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 PDCD2LQ9BRP1 358 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 CSRNP2Q9H175 543 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 TMEM60Q9H2L4 133 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 TUT1Q9H6E5 874 aaKnown RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 FAM13BQ9NYF5 915 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 DDX25Q9UHL0 483 aaKnown RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 ZFYVE26Q68DK2 2539 aa7.12□□□□□ -1.27
HDAC1-205ENST00000472928 ANKRD11Q6UB99 2663 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-205ENST00000472928 FAM208BQ5VWN6 2430 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 CNOT1A5YKK6 2376 aaKnown RBP7.11□□□□□ -1.27
HDAC1-205ENST00000472928 KIAA1671Q9BY89 1806 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 CEP295Q9C0D2 2601 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 PRMT3O60678 531 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 FSHRP23945 695 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 PRPHP41219 470 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 GRM5P41594 1212 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 SYKP43405 635 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 ARID5BQ14865 1188 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 DUSP6Q16828 381 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 NAALADL2Q58DX5 795 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 ARL6IP4Q66PJ3 421 aaKnown RBP7.11□□□□□ -1.27
HDAC1-205ENST00000472928 RUFY4Q6ZNE9 571 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 VSIG10LQ86VR7 867 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 CMTR2Q8IYT2 770 aaKnown RBP7.11□□□□□ -1.27
HDAC1-205ENST00000472928 FMR1NBQ8N0W7 255 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-205ENST00000472928 KLHL23Q8NBE8 558 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 LMBR1Q8WVP7 490 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 S1PR5Q9H228 398 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 TNMDQ9H2S6 317 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 SMOC2Q9H3U7 446 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 HPSEQ9Y251 543 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 TELO2Q9Y4R8 837 aa7.11□□□□□ -1.27
HDAC1-205ENST00000472928 PKD1L2Q7Z442 2459 aa7.1□□□□□ -1.27
HDAC1-205ENST00000472928 FRMPD4Q14CM0 1322 aa7.1□□□□□ -1.27
HDAC1-205ENST00000472928 FAM237AA0A1B0GTK4 181 aa7.1□□□□□ -1.27
HDAC1-205ENST00000472928 FSCN2O14926 492 aa7.1□□□□□ -1.27
HDAC1-205ENST00000472928 PER2O15055 1255 aa7.1□□□□□ -1.27
HDAC1-205ENST00000472928 SIAH2O43255 324 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms