RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 FSCN1Q16658 493 aaKnown RBP15.9■□□□□ 0.14
HIF3A-206ENST00000472815 KIAA0753Q2KHM9 967 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 SLC39A4Q6P5W5 647 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 SAAL1Q96ER3 474 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 ARHGAP39Q9C0H5 1083 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 PRMT7Q9NVM4 692 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-206ENST00000472815 MYO6Q9UM54 1294 aa15.9■□□□□ 0.14
HIF3A-206ENST00000472815 CLDN3O15551 220 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 TOM1L1O75674 476 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 GNAT1P11488 350 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 PON1P27169 355 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 HNRNPH3P31942 346 aaKnown RBP15.89■□□□□ 0.13
HIF3A-206ENST00000472815 MCCD1P59942 119 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-206ENST00000472815 PTENP60484 403 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 POLR2FP61218 127 aaKnown RBP15.89■□□□□ 0.13
HIF3A-206ENST00000472815 MFSD10Q14728 455 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 TMEM132AQ24JP5 1023 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 E4F1Q66K89 784 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-206ENST00000472815 RRAGAQ7L523 313 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 CCDC170Q8IYT3 715 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 C17orf53Q8N3J3 647 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-206ENST00000472815 LINC01465Q8N7H1 131 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 TRIB2Q92519 343 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 VTI1AQ96AJ9 217 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 MFSD14AQ96MC6 490 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 SPAG5Q96R06 1193 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 MSTO1Q9BUK6 570 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 CCDC113Q9H0I3 377 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 GABRQQ9UN88 632 aa15.89■□□□□ 0.13
HIF3A-206ENST00000472815 GOLGA8IPA6NC78 632 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 SOWAHDA6NJG2 315 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 GOLGA8JA6NMD2 632 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 INO80B-WBP1J3KQ70 363 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 ACKR2O00590 384 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 SEPT4O43236 478 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 MSCO60682 206 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 MYL3P08590 195 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 TRIM49P0CI25 452 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 TRIM49CP0CI26 452 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 RARBP10826 455 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 MXI1P50539 228 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 CYP24A1Q07973 514 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 ZNF410Q86VK4 478 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 CBWD2Q8IUF1 395 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 ERO1AQ96HE7 468 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 PRIMPOLQ96LW4 560 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 SCLT1Q96NL6 688 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 FNBP1Q96RU3 617 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 TCHPQ9BT92 498 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 TARS2Q9BW92 718 aaKnown RBP15.88■□□□□ 0.13
HIF3A-206ENST00000472815 INO80BQ9C086 356 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-206ENST00000472815 ANKFY1Q9P2R3 1169 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 RNF225M0QZC1 329 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-206ENST00000472815 SMIM10L2AP0DMW4 78 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 SMIM10L2BP0DMW5 78 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 PSEN2P49810 448 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 GJA9P57773 515 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 PRPF4BQ13523 1007 aaKnown RBP15.88■□□□□ 0.13
HIF3A-206ENST00000472815 PTPN14Q15678 1187 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 KLHDC7AQ5VTJ3 777 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 SFMBT2Q5VUG0 894 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 NFRKBQ6P4R8 1299 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 PDXDC1Q6P996 788 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 IFNLR1Q8IU57 520 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-206ENST00000472815 PARD3BQ8TEW8 1205 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 ZNF296Q8WUU4 475 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-206ENST00000472815 FAM213AQ9BRX8 229 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
HIF3A-206ENST00000472815 SRRDQ9UH36 339 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 PPP2R2CQ9Y2T4 447 aa15.88■□□□□ 0.13
HIF3A-206ENST00000472815 A0A0B4J269 797 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 LRRC53A6NM62 1247 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 ADRB2P07550 413 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 C6orf222P0C671 652 aaPredicted RBP15.87■□□□□ 0.13
HIF3A-206ENST00000472815 UCHL3P15374 230 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 KRT83P78385 493 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 FAM187BQ17R55 369 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 SLC9C1Q4G0N8 1177 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 KRT39Q6A163 491 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 TRIM65Q6PJ69 517 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 TXLNBQ8N3L3 684 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 NLRP7Q8WX94 980 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 BAP1Q92560 729 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 PPP1R13BQ96KQ4 1090 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 CCDC42Q96M95 316 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 ACO2Q99798 780 aaKnown RBP15.87■□□□□ 0.13
HIF3A-206ENST00000472815 GANQ9H2C0 597 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 FZD8Q9H461 694 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 DEF6Q9H4E7 631 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 TMEM8AQ9HCN3 771 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 NLRC4Q9NPP4 1024 aa15.87■□□□□ 0.13
HIF3A-206ENST00000472815 SMIM35A0A1B0GVV1 85 aa15.86■□□□□ 0.13
HIF3A-206ENST00000472815 HAS3O00219 553 aa15.86■□□□□ 0.13
HIF3A-206ENST00000472815 EPHB6O15197 1021 aa15.86■□□□□ 0.13
HIF3A-206ENST00000472815 NOL4O94818 638 aa15.86■□□□□ 0.13
HIF3A-206ENST00000472815 CCDC172P0C7W6 258 aa15.86■□□□□ 0.13
HIF3A-206ENST00000472815 SLC9A1P19634 815 aa15.86■□□□□ 0.13
HIF3A-206ENST00000472815 CHMP4BP1P59074 171 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms