RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 CDH7Q9ULB5 785 aa15.64■□□□□ 0.09
SMURF1-203ENST00000472627 MRPS17Q9Y2R5 130 aaKnown RBP15.64■□□□□ 0.09
SMURF1-203ENST00000472627 MIA3Q5JRA6 1907 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 DCDC2BA2VCK2 349 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 SPATA31D3P0C874 917 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 MYBP10242 640 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 CIITAP33076 1130 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 DMWDQ09019 674 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 NCBP1Q09161 790 aaKnown RBP15.63■□□□□ 0.09
SMURF1-203ENST00000472627 DRP2Q13474 957 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 SLC44A4Q53GD3 710 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 LIN9Q5TKA1 542 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 LRCH2Q5VUJ6 765 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 SPATA31D4Q6ZUB0 917 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 MRPL10Q7Z7H8 261 aaKnown RBP15.63■□□□□ 0.09
SMURF1-203ENST00000472627 HACE1Q8IYU2 909 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 EXOC6Q8TAG9 804 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 NETO1Q8TDF5 533 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 DDX23Q9BUQ8 820 aaKnown RBP15.63■□□□□ 0.09
SMURF1-203ENST00000472627 LRRC2Q9BYS8 371 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 GPR179Q6PRD1 2367 aa15.63■□□□□ 0.09
SMURF1-203ENST00000472627 SPTBN2O15020 2390 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 IGKV6-21A0A0C4DH24 114 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 CCDC196A0A1B0GTZ2 297 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 GOLGA8AA7E2F4 631 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 GOLGA8BA8MQT2 603 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 TGM5O43548 720 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 B4GALT3O60512 393 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 LRRN2O75325 713 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 IGHDP01880 384 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 ITGA4P13612 1032 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 NRLP54845 237 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
SMURF1-203ENST00000472627 USP41Q3LFD5 358 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 RNF20Q5VTR2 975 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 MIER3Q7Z3K6 550 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 SLC7A3Q8WY07 619 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 ZMYND12Q9H0C1 365 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 LTB4R2Q9NPC1 389 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 MARCH5Q9NX47 278 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 FNIP2Q9P278 1114 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 CACNA1IQ9P0X4 2223 aa15.62■□□□□ 0.09
SMURF1-203ENST00000472627 FOXD2O60548 495 aaPredicted RBP15.61■□□□□ 0.09
SMURF1-203ENST00000472627 LILRB5O75023 590 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 XYLBO75191 536 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 MAFO75444 373 aaPredicted RBP15.61■□□□□ 0.09
SMURF1-203ENST00000472627 ZMYND10O75800 440 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 ERLIN2O94905 339 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 HNRNPA1P09651 372 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMURF1-203ENST00000472627 NCLP19338 710 aaKnown RBP15.61■□□□□ 0.09
SMURF1-203ENST00000472627 UGCGQ16739 394 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 PPM1JQ5JR12 505 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 PARM1Q6UWI2 310 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 SRGAP1Q7Z6B7 1085 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 DDX1Q92499 740 aaKnown RBP15.61■□□□□ 0.09
SMURF1-203ENST00000472627 FGF14Q92915 247 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 PHF20Q9BVI0 1012 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 COL4A3BPQ9Y5P4 624 aa15.61■□□□□ 0.09
SMURF1-203ENST00000472627 DOCK8Q8NF50 2099 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 CACNA1GO43497 2377 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 SLC27A2O14975 620 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 DKC1O60832 514 aaKnown RBP eCLIP15.6■□□□□ 0.09
SMURF1-203ENST00000472627 LRP3O75074 770 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 RPS9P46781 194 aaKnown RBP15.6■□□□□ 0.09
SMURF1-203ENST00000472627 RCAN1P53805 252 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 FUT2Q10981 343 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 PCBP1Q15365 356 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■■■■■ 41.6
SMURF1-203ENST00000472627 ZNF852Q6ZMS4 543 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 TAS1R1Q7RTX1 841 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 COLGALT2Q8IYK4 626 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 RNF168Q8IYW5 571 aaPredicted RBP15.6■□□□□ 0.09
SMURF1-203ENST00000472627 CCDC148Q8NFR7 591 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 PSPC1Q8WXF1 523 aaKnown RBP15.6■□□□□ 0.09
SMURF1-203ENST00000472627 CCDC51Q96ER9 411 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 CCDC136Q96JN2 1154 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 UNC45AQ9H3U1 944 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 CHST7Q9NS84 486 aa15.6■□□□□ 0.09
SMURF1-203ENST00000472627 DDX11L8A8MPP1 907 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 SLC30A4O14863 429 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 MSH4O15457 936 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 USP11P51784 963 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 AKAP17AQ02040 695 aaKnown RBP15.59■□□□□ 0.09
SMURF1-203ENST00000472627 PPM1LQ5SGD2 360 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 CREB3L3Q68CJ9 461 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 LAIR1Q6GTX8 287 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 TPRG1Q6ZUI0 275 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 GRASPQ7Z6J2 395 aaPredicted RBP15.59■□□□□ 0.09
SMURF1-203ENST00000472627 GLYCTKQ8IVS8 523 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 KSR1Q8IVT5 923 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 NELL1Q92832 810 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 LENG9Q96B70 501 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 IER2Q9BTL4 223 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 TRIM6Q9C030 488 aaPredicted RBP15.59■□□□□ 0.09
SMURF1-203ENST00000472627 PRMT8Q9NR22 394 aaPredicted RBP15.59■□□□□ 0.09
SMURF1-203ENST00000472627 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
SMURF1-203ENST00000472627 PPME1Q9Y570 386 aa15.59■□□□□ 0.09
SMURF1-203ENST00000472627 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
SMURF1-203ENST00000472627 AXLP30530 894 aa15.58■□□□□ 0.08
SMURF1-203ENST00000472627 MLH1P40692 756 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms