RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 NAA25Q14CX7 972 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 TMEM132BQ14DG7 1078 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 HIBCHQ6NVY1 386 aaPredicted RBP14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 SCFD2Q8WU76 684 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 SLC24A3Q9HC58 644 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 PDXKO00764 312 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 KIF4AO95239 1232 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 GNA14O95837 355 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 MYCLP12524 364 aaPredicted RBP14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 ZNF131P52739 623 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 PPP1R7Q15435 360 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 SNRNP48Q6IEG0 339 aaKnown RBP14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 MIER3Q7Z3K6 550 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 NOD2Q9HC29 1040 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 CETN3O15182 167 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 TGFB1I1O43294 461 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 GAP43P17677 238 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 KLHL30Q0D2K2 578 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 MTMR3Q13615 1198 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 COG2Q14746 738 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 ZC2HC1CQ53FD0 456 aaPredicted RBP14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 DNAAF5Q86Y56 855 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 MYCT1Q8N699 235 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 SYN2Q92777 582 aaPredicted RBP14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 NUCKS1Q9H1E3 243 aaKnown RBP14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 KDM4CQ9H3R0 1056 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 ZMYM2Q9UBW7 1377 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 FAM13AO94988 1023 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 SATB1Q01826 763 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 TMC3Q7Z5M5 1100 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 P3H4Q92791 437 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 PARVGQ9HBI0 331 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 AMACRQ9UHK6 382 aa14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 NOC2LQ9Y3T9 749 aaKnown RBP14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCAMP4-207ENST00000472442 P4HBP07237 508 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 GHRP10912 638 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 MAPK7Q13164 816 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 ARHGEF16Q5VV41 709 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 KSR1Q8IVT5 923 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 DAW1Q8N136 415 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 TYW1Q9NV66 732 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 PNMA2Q9UL42 364 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 PGRMC1O00264 195 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 AKAP3O75969 853 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 ITGA4P13612 1032 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 DHX9Q08211 1270 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 SUPT20HL1Q3ZLR7 823 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 NEK9Q8TD19 979 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 XPO6Q96QU8 1125 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 TRIM6Q9C030 488 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.28□□□□□ -0.121e-9■■■□□ 15.7
SCAMP4-207ENST00000472442 SNCAIPQ9Y6H5 919 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 F8VZ95 297 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 KRIT1O00522 736 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 CES2O00748 559 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 BUB1BO60566 1050 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 CASP4P49662 377 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 OAZ1P54368 228 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 ZNF720Q7Z2F6 126 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 CCDC197Q8NCU1 140 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 ACTRT1Q8TDG2 376 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 STAMBPL1Q96FJ0 436 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 PBKQ96KB5 322 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 DPH5Q9H2P9 285 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 KCND2Q9NZV8 630 aa14.28□□□□□ -0.12
SCAMP4-207ENST00000472442 CCT8L1PA6NM43 557 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 BHMG1C9JSJ3 638 aaPredicted RBP14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 CLIC2O15247 247 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 TTI1O43156 1089 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 CALUO43852 315 aaPredicted RBP14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 RTN2O75298 545 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 CCNE2O96020 404 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 NR3C1P04150 777 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 KCNH2Q12809 1159 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 VGLL4Q14135 290 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 ASIC2Q16515 512 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 UGCGQ16739 394 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 TAX1BP1Q86VP1 789 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 VSIG10LQ86VR7 867 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 DHX37Q8IY37 1157 aaKnown RBP14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 TCP11Q8WWU5 503 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 CELF4Q9BZC1 486 aaKnown RBP14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 SPON1Q9HCB6 807 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 TBC1D22BQ9NU19 505 aa14.27□□□□□ -0.12
SCAMP4-207ENST00000472442 TESPA1A2RU30 521 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-207ENST00000472442 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-207ENST00000472442 ATP2A1O14983 1001 aa14.27□□□□□ -0.13
SCAMP4-207ENST00000472442 EIF3DO15371 548 aaKnown RBP eCLIP14.27□□□□□ -0.13
SCAMP4-207ENST00000472442 HIP1RO75146 1068 aa14.27□□□□□ -0.13
SCAMP4-207ENST00000472442 SKAP2O75563 359 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-207ENST00000472442 ERMARDQ5T6L9 678 aa14.27□□□□□ -0.13
SCAMP4-207ENST00000472442 FRMD5Q7Z6J6 570 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms