RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ARF4P18085 180 aaPredicted RBP18.45■□□□□ 0.54
CCM2-205ENST00000472223 IKBKEQ14164 716 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 PLEKHG4Q58EX7 1191 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 ARMCX5Q6P1M9 558 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 CNKSR3Q6P9H4 555 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 SLC27A1Q6PCB7 646 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 GLIS3Q8NEA6 775 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 NELFBQ8WX92 580 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 POMGNT1Q8WZA1 660 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 P2RX5Q93086 422 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 CPB2Q96IY4 423 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 AGO3Q9H9G7 860 aaKnown RBP18.45■□□□□ 0.54
CCM2-205ENST00000472223 ANKFY1Q9P2R3 1169 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 TNFSF13BQ9Y275 285 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 A0A1B0GUA9 196 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 B4GALT5O43286 388 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 EFCAB14O75071 495 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 LDHAP00338 332 aaKnown RBP18.44■□□□□ 0.54
CCM2-205ENST00000472223 CXCL10P02778 98 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 CSF2RAP15509 400 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 SYN1P17600 705 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 CCNE1P24864 410 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 ERCC5P28715 1186 aaPredicted RBP18.44■□□□□ 0.54
CCM2-205ENST00000472223 LRRC63Q05C16 580 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 KCNA1Q09470 495 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 MBTPS1Q14703 1052 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 KYAT1Q16773 422 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 DPCR1Q3MIW9 517 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 DCAF4L1Q3SXM0 396 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 ZNF568Q3ZCX4 644 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 MPZL3Q6UWV2 235 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 TAS1R3Q7RTX0 852 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 DBF4BQ8NFT6 615 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 BADQ92934 168 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 ZMYND8Q9ULU4 1186 aaPredicted RBP18.44■□□□□ 0.54
CCM2-205ENST00000472223 CTNND2Q9UQB3 1225 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 SIP14410 1827 aa18.44■□□□□ 0.54
CCM2-205ENST00000472223 PPP1R3GB7ZBB8 358 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 CAPN15O75808 1086 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 BMP6P22004 513 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 GARTP22102 1010 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 RAB27AP51159 221 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 AMHR2Q16671 573 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 ZBTB33Q86T24 672 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 MSTO1Q9BUK6 570 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 IL23AQ9NPF7 189 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 C1orf112Q9NSG2 853 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 RWDD2AQ9UIY3 292 aa18.43■□□□□ 0.54
CCM2-205ENST00000472223 MCF2P10911 925 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 HARSP12081 509 aaKnown RBP18.42■□□□□ 0.54
CCM2-205ENST00000472223 NOLC1Q14978 699 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCM2-205ENST00000472223 EDRF1Q3B7T1 1238 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 ANO6Q4KMQ2 910 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 CENPPQ6IPU0 288 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 NOC3LQ8WTT2 800 aaKnown RBP18.42■□□□□ 0.54
CCM2-205ENST00000472223 ADAM2Q99965 735 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 MTIF3Q9H2K0 278 aaKnown RBP18.42■□□□□ 0.54
CCM2-205ENST00000472223 KCTD10Q9H3F6 313 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 TSPY26PQ9H489 355 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 PDZD7Q9H5P4 517 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 KIAA1586Q9HCI6 787 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 AGPAT3Q9NRZ7 376 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 AGO2Q9UKV8 859 aaKnown RBP18.42■□□□□ 0.54
CCM2-205ENST00000472223 TRAF3IP3Q9Y228 551 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 FRMD4BQ9Y2L6 1034 aa18.42■□□□□ 0.54
CCM2-205ENST00000472223 SCN5AQ14524 2016 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 ABHD14A-ACY1A0A1B0GW23 586 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 CETN3O15182 167 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 CLIC2O15247 247 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 NPTXRO95502 500 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 FGBP02675 491 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 CD44P16070 742 aaKnown RBP18.41■□□□□ 0.54
CCM2-205ENST00000472223 ITGB8P26012 769 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 HOXA11P31270 313 aaPredicted RBP18.41■□□□□ 0.54
CCM2-205ENST00000472223 FKBP3Q00688 224 aaKnown RBP18.41■□□□□ 0.54
CCM2-205ENST00000472223 MYBPC2Q14324 1141 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 PSRC1Q6PGN9 363 aaPredicted RBP18.41■□□□□ 0.54
CCM2-205ENST00000472223 PGBD4Q96DM1 585 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 CCDC94Q9BW85 323 aaPredicted RBP18.41■□□□□ 0.54
CCM2-205ENST00000472223 DNAJC25Q9H1X3 360 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 RGS18Q9NS28 235 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 USP20Q9Y2K6 914 aa18.41■□□□□ 0.54
CCM2-205ENST00000472223 SMTNL1A8MU46 457 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 BECN2A8MW95 431 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 ANKRD63C9JTQ0 380 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 TULP1O00294 542 aaPredicted RBP18.4■□□□□ 0.54
CCM2-205ENST00000472223 TGFB1I1O43294 461 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 EXOC3O60645 756 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 BAIAP3O94812 1187 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 NR3C1P04150 777 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 HOXD13P35453 343 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 YARSP54577 528 aaKnown RBP18.4■□□□□ 0.54
CCM2-205ENST00000472223 STX17P56962 302 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 TPM4P67936 248 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 MCL1Q07820 350 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 ADAM9Q13443 819 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 ANKRD40Q6AI12 368 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 FOXR2Q6PJQ5 311 aa18.4■□□□□ 0.54
CCM2-205ENST00000472223 SLC24A5Q71RS6 500 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms