RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 DOK3Q7L591 496 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 KIAA0907Q7Z7F0 614 aaPredicted RBP6.76□□□□□ -1.33
CD46-213ENST00000471987 OR52N2Q8NGI0 321 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 ANO3Q9BYT9 981 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 MS4A5Q9H3V2 200 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 PRSS50Q9UI38 385 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 TMPRSS11EQ9UL52 423 aa6.76□□□□□ -1.33
CD46-213ENST00000471987 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.76□□□□□ -1.33
CD46-213ENST00000471987 KDM1AO60341 852 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 ABHD16AO95870 558 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 VPS72Q15906 364 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 KRTAP15-1Q3LI76 137 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 BROXQ5VW32 411 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 LRRC55Q6ZSA7 311 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 NPM2Q86SE8 214 aaKnown RBP6.75□□□□□ -1.33
CD46-213ENST00000471987 JAZF1Q86VZ6 243 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 MSL3Q8N5Y2 521 aaKnown RBP6.75□□□□□ -1.33
CD46-213ENST00000471987 OR14C36Q8NHC7 312 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 CPEB1Q9BZB8 566 aaKnown RBP6.75□□□□□ -1.33
CD46-213ENST00000471987 EMC7Q9NPA0 242 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 EIF2B4Q9UI10 523 aaKnown RBP6.75□□□□□ -1.33
CD46-213ENST00000471987 CLCA2Q9UQC9 943 aa6.75□□□□□ -1.33
CD46-213ENST00000471987 GSG1L2A8MUP6 293 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
CD46-213ENST00000471987 NR4A1P22736 598 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 MEF2AQ02078 507 aaPredicted RBP6.74□□□□□ -1.33
CD46-213ENST00000471987 FSTL1Q12841 308 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 PTPAQ15257 358 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 UBE3CQ15386 1083 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 PROKR1Q8TCW9 393 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 SLC5A5Q92911 643 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 ZG16BQ96DA0 208 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 LSM14BQ9BX40 385 aaKnown RBP6.74□□□□□ -1.33
CD46-213ENST00000471987 KCNH6Q9H252 994 aa6.74□□□□□ -1.33
CD46-213ENST00000471987 EVLQ9UI08 416 aaPredicted RBP6.74□□□□□ -1.33
CD46-213ENST00000471987 PRR5-ARHGAP8B1AHC4 643 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 PPFIA2O75334 1257 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 HSP90B1P14625 803 aaKnown RBP6.73□□□□□ -1.33
CD46-213ENST00000471987 TIGD2Q4W5G0 525 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 PLEKHG4Q58EX7 1191 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 CCDC62Q6P9F0 684 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 KCNV1Q6PIU1 500 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 RASSF3Q86WH2 238 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 LYSMD2Q8IV50 215 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 DNAJC10Q8IXB1 793 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 LEO1Q8WVC0 666 aaPredicted RBP6.73□□□□□ -1.33
CD46-213ENST00000471987 NDC1Q9BTX1 674 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 MLST8Q9BVC4 326 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 MAPRE3Q9UPY8 281 aa6.73□□□□□ -1.33
CD46-213ENST00000471987 NOC2LQ9Y3T9 749 aaKnown RBP6.73□□□□□ -1.33
CD46-213ENST00000471987 PRAMEF4O60810 478 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 RHOBTB3O94955 611 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 GCP02774 474 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 CLEC2LP0C7M8 214 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 LAG3P18627 525 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 NANOS3P60323 173 aaKnown RBP6.72□□□□□ -1.33
CD46-213ENST00000471987 TRIM25Q14258 630 aaKnown RBP6.72□□□□□ -1.33
CD46-213ENST00000471987 ATP13A4Q4VNC1 1196 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 MBNL2Q5VZF2 373 aaKnown RBP6.72□□□□□ -1.33
CD46-213ENST00000471987 SLC41A1Q8IVJ1 513 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 DCLRE1CQ96SD1 692 aaKnown RBP6.72□□□□□ -1.33
CD46-213ENST00000471987 SLC46A2Q9BY10 475 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 HS3ST4Q9Y661 456 aa6.72□□□□□ -1.33
CD46-213ENST00000471987 A0A087X0B3 334 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 PDE8AO60658 829 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 MYCLP1P12525 358 aaPredicted RBP6.71□□□□□ -1.34
CD46-213ENST00000471987 APBA1Q02410 837 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 TAF7LQ5H9L4 462 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 GPRIN1Q7Z2K8 1008 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 VRK3Q8IV63 474 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 PAWRQ96IZ0 340 aaKnown RBP6.71□□□□□ -1.34
CD46-213ENST00000471987 CDC5LQ99459 802 aaKnown RBP6.71□□□□□ -1.34
CD46-213ENST00000471987 CDY2AQ9Y6F7 541 aa6.71□□□□□ -1.34
CD46-213ENST00000471987 AHRRA9YTQ3 701 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 B5MCH6 92 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 ENPP3O14638 875 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 APOBEC3AP31941 199 aaPredicted RBP6.7□□□□□ -1.34
CD46-213ENST00000471987 DHCR24Q15392 516 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 PITRM1Q5JRX3 1037 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 XYLT1Q86Y38 959 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 SNX33Q8WV41 574 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 USP7Q93009 1102 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 MYEOVQ96EZ4 313 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 CRAMP1Q96RY5 1269 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 SPON1Q9HCB6 807 aa6.7□□□□□ -1.34
CD46-213ENST00000471987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.69□□□□□ -1.34
CD46-213ENST00000471987 GASTP01350 101 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 BPIP17213 487 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 COL10A1Q03692 680 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 DRICH1Q6PGQ1 229 aaPredicted RBP6.69□□□□□ -1.34
CD46-213ENST00000471987 GDF7Q7Z4P5 450 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 ZNF575Q86XF7 245 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 KCTD10Q9H3F6 313 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 ZNF768Q9H5H4 540 aaKnown RBP6.69□□□□□ -1.34
CD46-213ENST00000471987 TRPM5Q9NZQ8 1165 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 PACSIN3Q9UKS6 424 aa6.69□□□□□ -1.34
CD46-213ENST00000471987 GAGE12BA1L429 117 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
CD46-213ENST00000471987 DIRC3C9JPN6 131 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms