RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CENPFP49454 3210 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 SPDYE16A6NNV3 312 aaPredicted RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 LRRIQ3A6PVS8 624 aaPredicted RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 ZNF862O60290 1169 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 EXOC3O60645 756 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 FTCDO95954 541 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 MYBL2P10244 700 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 MCM3P25205 808 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 TNFRSF8P28908 595 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 HMGCS2P54868 508 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 NPEPPSP55786 919 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 DLG4P78352 724 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 PPP3CAQ08209 521 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 KIF22Q14807 665 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 DRAP1Q14919 205 aaPredicted RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 PRAMEF18Q5VWM3 479 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 PLA2G4FQ68DD2 849 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 PHLDB3Q6NSJ2 640 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 ALKBH5Q6P6C2 394 aaKnown RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 NSMFQ6X4W1 530 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 CCNI2Q6ZMN8 369 aaPredicted RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 INTS8Q75QN2 995 aaKnown RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 MAEAQ7L5Y9 396 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 HAUS6Q7Z4H7 955 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 NLRX1Q86UT6 975 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 MAP4K3Q8IVH8 894 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 SYCP3Q8IZU3 236 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 SLC17A8Q8NDX2 589 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 TMEM161BQ8NDZ6 487 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 ZSWIM2Q8NEG5 633 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.97□□□□□ -1.29
SPEN-204ENST00000471538 CAGE1Q8TC20 777 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 KCNN1Q92952 543 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 HVCN1Q96D96 273 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 HHIPL1Q96JK4 782 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 EPAS1Q99814 870 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 NTPCRQ9BSD7 190 aaKnown RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 VIPAS39Q9H9C1 493 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 GPRC5CQ9NQ84 441 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
SPEN-204ENST00000471538 PICK1Q9NRD5 415 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 CYP39A1Q9NYL5 469 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 GGA3Q9NZ52 723 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 SMARCAL1Q9NZC9 954 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 HSPBP1Q9NZL4 362 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 EHD2Q9NZN4 543 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 STXBP5LQ9Y2K9 1186 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 TELO2Q9Y4R8 837 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 SAMM50Q9Y512 469 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 DOCK5Q9H7D0 1870 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 IGSF9BQ9UPX0 1349 aa6.97□□□□□ -1.29
SPEN-204ENST00000471538 TESPA1A2RU30 521 aaPredicted RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 SPATA31C2B4DYI2 1134 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 SLC16A4O15374 487 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 N4BP1O75113 896 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 STAM2O75886 525 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ADRB2P07550 413 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ADSSP30520 456 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 CXCR5P32302 372 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ICAM3P32942 547 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 AARSP49588 968 aaKnown RBP eCLIP6.96□□□□□ -1.32e-9■■■■□ 26.2
SPEN-204ENST00000471538 VAMP7P51809 220 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 PEX3P56589 373 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 RTP1P59025 263 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ENPEPQ07075 957 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 PLS1Q14651 629 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ENOX2Q16206 610 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 SLC39A4Q6P5W5 647 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ABHD15Q6UXT9 468 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 DNAAF5Q86Y56 855 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 FMNL3Q8IVF7 1028 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 XXYLT1Q8NBI6 393 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 TPCN2Q8NHX9 752 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 NSUN6Q8TEA1 469 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 AENQ8WTP8 325 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 HDAC7Q8WUI4 952 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 SPIRE2Q8WWL2 714 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 BSNDQ8WZ55 320 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 VTI1AQ96AJ9 217 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 DCPSQ96C86 337 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 MS4A14Q96JA4 679 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 FBXL18Q96ME1 805 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 IWS1Q96ST2 819 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 PSMB7Q99436 277 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 SH2D3AQ9BRG2 576 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 LRRC1Q9BTT6 524 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 TEX13BQ9BXU2 312 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 PRKD2Q9BZL6 878 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 PCIF1Q9H4Z3 704 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ACAD9Q9H845 621 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ZNF408Q9H9D4 720 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 PDE11AQ9HCR9 933 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 XPNPEP1Q9NQW7 623 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 RBM12Q9NTZ6 932 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 TSR3Q9UJK0 312 aaKnown RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 TMEM59LQ9UK28 342 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 PRDM4Q9UKN5 801 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 TBX20Q9UMR3 447 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms