RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	NR1I3	Q14994	352 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	BRD3	Q15059	726 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	PPP2R5B	Q15173	497 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	STK38	Q15208	465 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	UBE3C	Q15386	1083 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ELF2	Q15723	593 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	IMMT	Q16891	758 aa	Known RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ERCC6L	Q2NKX8	1250 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	NBPF9	Q3BBW0	867 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	LMBR1L	Q6UX01	489 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	SYT10	Q6XYQ8	523 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	LIPI	Q6XZB0	460 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC129	Q6ZRS4	1044 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF662	Q6ZS27	426 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	CEP128	Q6ZU80	1094 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	DDX46	Q7L014	1031 aa	Known RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	UBE3B	Q7Z3V4	1068 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	COL23A1	Q86Y22	540 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ADGRG2	Q8IZP9	1017 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	DEFB123	Q8N688	67 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	MLKL	Q8NB16	471 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	NCOA7	Q8NI08	942 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	APPBP2	Q92624	585 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	OSBP2	Q969R2	916 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	PANX2	Q96RD6	677 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	NAA15	Q9BXJ9	866 aa	Known RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	TSPYL1	Q9H0U9	437 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	SIL1	Q9H173	461 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	PCED1A	Q9H1Q7	454 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	BRMS1	Q9HCU9	246 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	CWC25	Q9NXE8	425 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	KLHL14	Q9P2G3	628 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ADAMTS1	Q9UHI8	967 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	RAB21	Q9UL25	225 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	TCFL5	Q9UL49	500 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	THRAP3	Q9Y2W1	955 aa	Known RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF281	Q9Y2X9	895 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	CDHR2	Q9BYE9	1310 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	BRCA1	P38398	1863 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438		A0A1B0GTL3	188 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC151	A5D8V7	595 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	VWA3A	A6NCI4	1184 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	KIF28P	B7ZC32	967 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	GOLIM4	O00461	696 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	SH2B2	O14492	632 aa	Predicted RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	CYP27B1	O15528	508 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	PRC1	O43663	620 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	DTNB	O60941	627 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	UBOX5	O94941	541 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	TBC1D8	O95759	1140 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	SYP	P08247	313 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	IFIT1	P09914	478 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	IFNAR1	P17181	557 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCNF	P41002	786 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	SYK	P43405	635 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	UBASH3A	P57075	661 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	TIMM10	P62072	90 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCT2	P78371	535 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	AIMP1	Q12904	312 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	MORC3	Q14149	939 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	SHC4	Q6S5L8	630 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	TMCO3	Q6UWJ1	677 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	SYNE3	Q6ZMZ3	975 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	KRBA2	Q6ZNG9	492 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438		Q7L0L9	218 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	HS2ST1	Q7LGA3	356 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	APTX	Q7Z2E3	356 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	METTL16	Q86W50	562 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	TC2N	Q8N9U0	490 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	LINC00116	Q8NCU8	138 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	MSANTD4	Q8NCY6	345 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	CHST13	Q8NET6	341 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	IGDCC4	Q8TDY8	1250 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	GIPC2	Q8TF65	315 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	RAPGEF4	Q8WZA2	1011 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	UBXN4	Q92575	508 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	DPF2	Q92785	391 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	EXOC4	Q96A65	974 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC51	Q96ER9	411 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	TCTN2	Q96GX1	697 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	MAP6	Q96JE9	813 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	FUT8	Q9BYC5	575 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	FOXP3	Q9BZS1	431 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	FOXP1	Q9H334	677 aa	Predicted RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	EHMT1	Q9H9B1	1298 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	NCOA5	Q9HCD5	579 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	INTS13	Q9NVM9	706 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	TMEM51	Q9NW97	253 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	TRMT1	Q9NXH9	659 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	MYO1A	Q9UBC5	1043 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	SUSD2	Q9UGT4	822 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	GGT7	Q9UJ14	662 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms