RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 KRT24Q2M2I5 525 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF568Q3ZCX4 644 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SLC27A3Q5K4L6 730 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ERAP2Q6P179 960 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 MICU2Q8IYU8 434 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SIX5Q8N196 739 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PLBD2Q8NHP8 589 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 JADE3Q92613 823 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ASNSD1Q9NWL6 643 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ADD3Q9UEY8 706 aaKnown RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PNMA8BQ9ULN7 279 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 TNNQ9UQP3 1299 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SNX24Q9Y343 169 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CLIC4Q9Y696 253 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ITSN2Q9NZM3 1697 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 FAM25AB3EWG3 89 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 FAM25CB3EWG5 89 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 FAM25GB3EWG6 89 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 FAM47E-STBD1D6RA91 191 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SRGAP2O75044 1071 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PSAPP07602 524 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ADORA2BP29275 332 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 RAD51Q06609 339 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 RBBP4Q09028 425 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PDAP1Q13442 181 aaKnown RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 LRRC14Q15048 493 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 TBC1D9BQ66K14 1250 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CATSPER4Q7RTX7 472 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CDH24Q86UP0 819 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ARHGEF25Q86VW2 580 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 STX12Q86Y82 276 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 DCTPP1Q9H773 170 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 IARS2Q9NSE4 1012 aaKnown RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 RPS6KB2Q9UBS0 482 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 MAP3K5Q99683 1374 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ZMYM6O95789 1325 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PIPSLA2A3N6 862 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 HNRNPRO43390 633 aaKnown RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ATP9BO43861 1147 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 APBA3O96018 575 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SERPING1P05155 500 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 TCN1P20061 433 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 MZF1P28698 734 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 NDUFA8P51970 172 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 DMTNQ08495 405 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 DMPKQ09013 629 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PTGDRQ13258 359 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SGO1Q5FBB7 561 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CCDC60Q8IWA6 550 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 MB21D1Q8N884 522 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 DTX3LQ8TDB6 740 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 P2RX5Q93086 422 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 IL1RL2Q9HB29 575 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PSD3Q9NYI0 1048 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SEPT3Q9UH03 358 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 GDAQ9Y2T3 454 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CASKIN1Q8WXD9 1431 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CYP27A1Q02318 531 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 KDSRQ06136 332 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 COG2Q14746 738 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 NFRKBQ6P4R8 1299 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 MDM1Q8TC05 714 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 DDI1Q8WTU0 396 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 HDHD2Q9H0R4 259 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 RSPH10B2B2RC85 870 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 M0QYV0 167 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 RSPH10BP0C881 870 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 MXI1P50539 228 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CYLC2Q14093 348 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 NDUFA5Q16718 116 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ATAD3BQ5T9A4 648 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 IFNEQ86WN2 208 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 KRT73Q86Y46 540 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 THNSL1Q8IYQ7 743 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 OR8H2Q8N162 312 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 CALML6Q8TD86 181 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ELMO2Q96JJ3 720 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SIK2Q9H0K1 926 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 KRCC1Q9NPI7 259 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 PKP3Q9Y446 797 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 TTC37Q6PGP7 1564 aa7.27□□□□□ -1.24
BRCA1-210ENST00000471181 ABCC4O15439 1325 aa7.27□□□□□ -1.24
BRCA1-210ENST00000471181 SNPHO15079 494 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 RNMTO43148 476 aaKnown RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 NFICP08651 508 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 PGM1P36871 562 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 PSMD7P51665 324 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ROR1Q01973 937 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SURF1Q15526 300 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 NUDT18Q6ZVK8 323 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF614Q8N883 585 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 DTNBP1Q96EV8 351 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 TSEN34Q9BSV6 310 aaKnown RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 BRIP1Q9BX63 1249 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SPATA16Q9BXB7 569 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 EPN3Q9H201 632 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms