RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 SRSF1Q07955 248 aaKnown RBP eCLIP8.3□□□□□ -1.08
LDHB-206ENST00000470985 CERKLQ49MI3 558 aaPredicted RBP8.3□□□□□ -1.08
LDHB-206ENST00000470985 ZNF618Q5T7W0 954 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 IL31Q6EBC2 164 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 SNRNP48Q6IEG0 339 aaKnown RBP8.3□□□□□ -1.08
LDHB-206ENST00000470985 OGFOD3Q6PK18 319 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 ANKRD44Q8N8A2 993 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 TDRD5Q8NAT2 981 aaKnown RBP8.3□□□□□ -1.08
LDHB-206ENST00000470985 SPPL3Q8TCT6 385 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 POF1BQ8WVV4 589 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 ALKBH8Q96BT7 664 aaKnown RBP8.3□□□□□ -1.08
LDHB-206ENST00000470985 RUNDC1Q96C34 613 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 IL17RAQ96F46 866 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 STK31Q9BXU1 1019 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 OSBPL7Q9BZF2 842 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 BICC1Q9H694 974 aaKnown RBP8.3□□□□□ -1.08
LDHB-206ENST00000470985 RC3H2Q9HBD1 1191 aaKnown RBP8.3□□□□□ -1.08
LDHB-206ENST00000470985 PCDHGA2Q9Y5H1 932 aa8.3□□□□□ -1.08
LDHB-206ENST00000470985 ADGRA3Q8IWK6 1321 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 RNGTTO60942 597 aaKnown RBP8.29□□□□□ -1.08
LDHB-206ENST00000470985 KCNK5O95279 499 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 PARNO95453 639 aaKnown RBP8.29□□□□□ -1.08
LDHB-206ENST00000470985 PRNPP04156 253 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 SHMT1P34896 483 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
LDHB-206ENST00000470985 GRM2Q14416 872 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 ATP2B3Q16720 1220 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 DUSP6Q16828 381 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 TRIM71Q2Q1W2 868 aaKnown RBP8.29□□□□□ -1.08
LDHB-206ENST00000470985 SPTY2D1Q68D10 685 aaPredicted RBP8.29□□□□□ -1.08
LDHB-206ENST00000470985 LLGL2Q6P1M3 1020 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 SND1Q7KZF4 910 aaKnown RBP eCLIP8.29□□□□□ -1.083e-10■□□□□ 9
LDHB-206ENST00000470985 ATG9AQ7Z3C6 839 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 ZDHHC14Q8IZN3 488 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 ZBTB44Q8NCP5 570 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 EPS8L3Q8TE67 593 aaKnown RBP8.29□□□□□ -1.08
LDHB-206ENST00000470985 ATRIPQ8WXE1 791 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 KCNB2Q92953 911 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 ABCB6Q9NP58 842 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 SEMA4GQ9NTN9 838 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 DCTN4Q9UJW0 460 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 CA14Q9ULX7 337 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 AKAP2Q9Y2D5 859 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 Q9Y3F1 56 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 SAMM50Q9Y512 469 aa8.29□□□□□ -1.08
LDHB-206ENST00000470985 SPTAN1Q13813 2472 aaKnown RBP8.29□□□□□ -1.08
LDHB-206ENST00000470985 MMP3P08254 477 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 LIG1P18858 919 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 ID3Q02535 119 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 KCNC3Q14003 757 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 MSMPQ1L6U9 139 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 ZNF528Q3MIS6 628 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 RABL6Q3YEC7 729 aaPredicted RBP8.28□□□□□ -1.08
LDHB-206ENST00000470985 PI16Q6UXB8 463 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 ADGRA1Q86SQ6 560 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 TMEFF1Q8IYR6 380 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 STK11IPQ8N1F8 1099 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 FEZF2Q8TBJ5 459 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 TEX13BQ9BXU2 312 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 EMILIN2Q9BXX0 1053 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 RWDD3Q9Y3V2 267 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 RELNP78509 3460 aa8.28□□□□□ -1.08
LDHB-206ENST00000470985 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 GPR182O15218 404 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 ECEL1O95672 775 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 CTSBP07858 339 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 LDHCP07864 332 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 GSTP1P09211 210 aaKnown RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 NBPF7P0C2Y1 421 aaPredicted RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 MFAP1P55081 439 aaKnown RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 GSTO1P78417 241 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 CSTF1Q05048 431 aaKnown RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 TDGQ13569 410 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 PLEKHG4Q58EX7 1191 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 IQSEC1Q6DN90 963 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 SIAH1Q8IUQ4 282 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 ABI1Q8IZP0 508 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 FOXQ1Q9C009 403 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 GSX1Q9H4S2 264 aaPredicted RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 RXFP3Q9NSD7 469 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 IFT57Q9NWB7 429 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 C9orf78Q9NZ63 289 aaPredicted RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 RAI14Q9P0K7 980 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 SERPINB13Q9UIV8 391 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 SLC5A6Q9Y289 635 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 RAI2Q9Y5P3 530 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 MRPL42Q9Y6G3 142 aaKnown RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 ASXL3Q9C0F0 2248 aa8.27□□□□□ -1.09
LDHB-206ENST00000470985 PDS5AQ29RF7 1337 aaKnown RBP8.27□□□□□ -1.09
LDHB-206ENST00000470985 EYA2O00167 538 aa8.26□□□□□ -1.09
LDHB-206ENST00000470985 MPHOSPH10O00566 681 aaKnown RBP8.26□□□□□ -1.09
LDHB-206ENST00000470985 GIPC1O14908 333 aa8.26□□□□□ -1.09
LDHB-206ENST00000470985 TBC1D4O60343 1298 aa8.26□□□□□ -1.09
LDHB-206ENST00000470985 MAPK1P28482 360 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms