RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 A0A1W2PR48 441 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 PRR5-ARHGAP8B1AHC4 643 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 LPLP06858 475 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 GYPEP15421 78 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 GYS2P54840 703 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 LGALS4P56470 323 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 WNT3AP56704 352 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 APBA1Q02410 837 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 FSTL1Q12841 308 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 TRIM25Q14258 630 aaKnown RBP5.54□□□□□ -1.52
ITGA6-209ENST00000470259 HTR3DQ70Z44 454 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 DDX46Q7L014 1031 aaKnown RBP5.54□□□□□ -1.52
ITGA6-209ENST00000470259 HDGFL2Q7Z4V5 671 aaPredicted RBP5.54□□□□□ -1.52
ITGA6-209ENST00000470259 NOP9Q86U38 636 aaKnown RBP5.54□□□□□ -1.52
ITGA6-209ENST00000470259 PRRX2Q99811 253 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 SLKQ9H2G2 1235 aaPredicted RBP5.54□□□□□ -1.52
ITGA6-209ENST00000470259 SPON1Q9HCB6 807 aa5.54□□□□□ -1.52
ITGA6-209ENST00000470259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.53□□□□□ -1.52
ITGA6-209ENST00000470259 TMEM191CA6NGB0 347 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 ENPP3O14638 875 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 LTA4HP09960 611 aaKnown RBP5.53□□□□□ -1.52
ITGA6-209ENST00000470259 UGT8Q16880 541 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 NAIF1Q69YI7 327 aaPredicted RBP5.53□□□□□ -1.52
ITGA6-209ENST00000470259 LAIR1Q6GTX8 287 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 XYLT1Q86Y38 959 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 LDLRAD3Q86YD5 345 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 ULK2Q8IYT8 1036 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 TTC1Q99614 292 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 KCTD10Q9H3F6 313 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 IFT22Q9H7X7 185 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 TMPRSS11EQ9UL52 423 aa5.53□□□□□ -1.52
ITGA6-209ENST00000470259 ABHD16AO95870 558 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 CANXP27824 592 aaKnown RBP5.52□□□□□ -1.53
ITGA6-209ENST00000470259 INHBEP58166 350 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 STRN3Q13033 797 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 PTPAQ15257 358 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 DHCR24Q15392 516 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 VPS72Q15906 364 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 SMN1Q16637 294 aaKnown RBP5.52□□□□□ -1.53
ITGA6-209ENST00000470259 TIGD2Q4W5G0 525 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 PLEKHG4Q58EX7 1191 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 PITRM1Q5JRX3 1037 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 LY6G5CQ5SRR4 150 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 MRGPREQ86SM8 312 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 UBR7Q8N806 425 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 OR52N2Q8NGI0 321 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 PROKR1Q8TCW9 393 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 LSM14BQ9BX40 385 aaKnown RBP5.52□□□□□ -1.53
ITGA6-209ENST00000470259 CPEB1Q9BZB8 566 aaKnown RBP5.52□□□□□ -1.53
ITGA6-209ENST00000470259 PRDM12Q9H4Q4 367 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 EDARQ9UNE0 448 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.52□□□□□ -1.53
ITGA6-209ENST00000470259 CDY2AQ9Y6F7 541 aa5.52□□□□□ -1.53
ITGA6-209ENST00000470259 NEMP1O14524 444 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 TRIM24O15164 1050 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 PPFIA4O75335 1185 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 ULK1O75385 1050 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 ITGB1P05556 798 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 BPIP17213 487 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 APOBEC3AP31941 199 aaPredicted RBP5.51□□□□□ -1.53
ITGA6-209ENST00000470259 ID4P47928 161 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 PURAQ00577 322 aaKnown RBP5.51□□□□□ -1.53
ITGA6-209ENST00000470259 METTL24Q5JXM2 366 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 KCNV1Q6PIU1 500 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 ABHD15Q6UXT9 468 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 LYSMD2Q8IV50 215 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 RPUSD2Q8IZ73 545 aaKnown RBP5.51□□□□□ -1.53
ITGA6-209ENST00000470259 MDM1Q8TC05 714 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 EAF2Q96CJ1 260 aaPredicted RBP5.51□□□□□ -1.53
ITGA6-209ENST00000470259 NDC1Q9BTX1 674 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 TOPORSQ9NS56 1045 aaPredicted RBP5.51□□□□□ -1.53
ITGA6-209ENST00000470259 TRPM5Q9NZQ8 1165 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 POGKQ9P215 609 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 FZD1Q9UP38 647 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 CLCA2Q9UQC9 943 aa5.51□□□□□ -1.53
ITGA6-209ENST00000470259 GRXCR1A8MXD5 290 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 ZEB2O60315 1214 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 SESN3P58005 492 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 CDK17Q00537 523 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 MEF2AQ02078 507 aaPredicted RBP5.5□□□□□ -1.53
ITGA6-209ENST00000470259 PDCD1Q15116 288 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 C19orf54Q5BKX5 351 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
ITGA6-209ENST00000470259 DOK3Q7L591 496 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 SNX33Q8WV41 574 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 LENG9Q96B70 501 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 ZG16BQ96DA0 208 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 KCNH6Q9H252 994 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 ZNF768Q9H5H4 540 aaKnown RBP5.5□□□□□ -1.53
ITGA6-209ENST00000470259 TBX22Q9Y458 520 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 DMRT1Q9Y5R6 373 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 ZMYM3Q14202 1370 aa5.5□□□□□ -1.53
ITGA6-209ENST00000470259 FOXN1O15353 648 aa5.49□□□□□ -1.53
ITGA6-209ENST00000470259 ITGA10O75578 1167 aa5.49□□□□□ -1.53
ITGA6-209ENST00000470259 LAG3P18627 525 aa5.49□□□□□ -1.53
ITGA6-209ENST00000470259 KRT4P19013 534 aa5.49□□□□□ -1.53
ITGA6-209ENST00000470259 NR4A1P22736 598 aa5.49□□□□□ -1.53
ITGA6-209ENST00000470259 SOX5P35711 763 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms