RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 CT83Q5H943 113 aa7.54□□□□□ -1.2
COL11A1-208ENST00000470170 Q6ZPA2 131 aa7.54□□□□□ -1.2
COL11A1-208ENST00000470170 RNF180Q86T96 592 aa7.54□□□□□ -1.2
COL11A1-208ENST00000470170 NOP9Q86U38 636 aaKnown RBP7.54□□□□□ -1.2
COL11A1-208ENST00000470170 XYLT1Q86Y38 959 aa7.54□□□□□ -1.2
COL11A1-208ENST00000470170 CPT1CQ8TCG5 803 aa7.54□□□□□ -1.2
COL11A1-208ENST00000470170 KCTD10Q9H3F6 313 aa7.54□□□□□ -1.2
COL11A1-208ENST00000470170 NEMP1O14524 444 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 TMEM127O75204 238 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 KRT4P19013 534 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 PTGS2P35354 604 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 WNT3AP56704 352 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 MRGPREQ86SM8 312 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 FAM83AQ86UY5 434 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 THNSL2Q86YJ6 484 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 UBR7Q8N806 425 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 OR52N2Q8NGI0 321 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 HAS1Q92839 578 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 TOPORSQ9NS56 1045 aaPredicted RBP7.53□□□□□ -1.2
COL11A1-208ENST00000470170 CDY2AQ9Y6F7 541 aa7.53□□□□□ -1.2
COL11A1-208ENST00000470170 LTA4HP09960 611 aaKnown RBP7.52□□□□□ -1.21
COL11A1-208ENST00000470170 LGALS4P56470 323 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 ABHD15Q6UXT9 468 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 HDGFL2Q7Z4V5 671 aaPredicted RBP7.52□□□□□ -1.21
COL11A1-208ENST00000470170 MRGPRGQ86SM5 289 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 ULK2Q8IYT8 1036 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 RPUSD2Q8IZ73 545 aaKnown RBP7.52□□□□□ -1.21
COL11A1-208ENST00000470170 GLB1L3Q8NCI6 653 aaPredicted RBP7.52□□□□□ -1.21
COL11A1-208ENST00000470170 CLRN3Q8NCR9 226 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 RSAD2Q8WXG1 361 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 PDCD2LQ9BRP1 358 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 IFT22Q9H7X7 185 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 EDARQ9UNE0 448 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.52□□□□□ -1.21
COL11A1-208ENST00000470170 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
COL11A1-208ENST00000470170 SCAF4O95104 1147 aaKnown RBP7.51□□□□□ -1.21
COL11A1-208ENST00000470170 GYPEP15421 78 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 STRN3Q13033 797 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 VPS72Q15906 364 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 DOK3Q7L591 496 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 STRA8Q7Z7C7 330 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 EAF2Q96CJ1 260 aaPredicted RBP7.51□□□□□ -1.21
COL11A1-208ENST00000470170 TTPALQ9BTX7 342 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 MLST8Q9BVC4 326 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 ZNF768Q9H5H4 540 aaKnown RBP7.51□□□□□ -1.21
COL11A1-208ENST00000470170 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
COL11A1-208ENST00000470170 ZMYM3Q14202 1370 aa7.5□□□□□ -1.21
COL11A1-208ENST00000470170 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.5□□□□□ -1.21
COL11A1-208ENST00000470170 APOBEC3AP31941 199 aaPredicted RBP7.5□□□□□ -1.21
COL11A1-208ENST00000470170 PCSK4Q6UW60 755 aa7.5□□□□□ -1.21
COL11A1-208ENST00000470170 DDX46Q7L014 1031 aaKnown RBP7.5□□□□□ -1.21
COL11A1-208ENST00000470170 RHOUQ7L0Q8 258 aa7.5□□□□□ -1.21
COL11A1-208ENST00000470170 SYNE4Q8N205 404 aa7.5□□□□□ -1.21
COL11A1-208ENST00000470170 LILRA3Q8N6C8 439 aaPredicted RBP7.5□□□□□ -1.21
COL11A1-208ENST00000470170 LENG9Q96B70 501 aa7.5□□□□□ -1.21
COL11A1-208ENST00000470170 TTC1Q99614 292 aa7.5□□□□□ -1.21
COL11A1-208ENST00000470170 PRRX2Q99811 253 aa7.5□□□□□ -1.21
COL11A1-208ENST00000470170 EIF2B4Q9UI10 523 aaKnown RBP7.5□□□□□ -1.21
COL11A1-208ENST00000470170 TRIM24O15164 1050 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 ZFP36P26651 326 aaKnown RBP7.49□□□□□ -1.21
COL11A1-208ENST00000470170 CANXP27824 592 aaKnown RBP7.49□□□□□ -1.21
COL11A1-208ENST00000470170 APBA1Q02410 837 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 UGT8Q16880 541 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 TAF7LQ5H9L4 462 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 METTL24Q5JXM2 366 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 SNX33Q8WV41 574 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 FAM193BQ96PV7 902 aaPredicted RBP7.49□□□□□ -1.21
COL11A1-208ENST00000470170 CDC5LQ99459 802 aaKnown RBP7.49□□□□□ -1.21
COL11A1-208ENST00000470170 AGAP2Q99490 1192 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 KCNH6Q9H252 994 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 FZD1Q9UP38 647 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 DMRT1Q9Y5R6 373 aa7.49□□□□□ -1.21
COL11A1-208ENST00000470170 AHRRA9YTQ3 701 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 ZEB2O60315 1214 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 RAMP2O60895 175 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 ITGA10O75578 1167 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 RECQL4O94761 1208 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 CTSSP25774 331 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 SESN3P58005 492 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 INHBEP58166 350 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 MEF2AQ02078 507 aaPredicted RBP7.48□□□□□ -1.21
COL11A1-208ENST00000470170 FSTL1Q12841 308 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 CSRP2Q16527 193 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 SMN1Q16637 294 aaKnown RBP7.48□□□□□ -1.21
COL11A1-208ENST00000470170 FSCN1Q16658 493 aaKnown RBP7.48□□□□□ -1.21
COL11A1-208ENST00000470170 ANKS6Q68DC2 871 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 MDM1Q8TC05 714 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 PROKR1Q8TCW9 393 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 NDC1Q9BTX1 674 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 SPON1Q9HCB6 807 aa7.48□□□□□ -1.21
COL11A1-208ENST00000470170 TLDC2A0PJX2 215 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 PRR5-ARHGAP8B1AHC4 643 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 LEFTY2O00292 366 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 FOXN1O15353 648 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 ULK1O75385 1050 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 ITGB1P05556 798 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 HSP90B1P14625 803 aaKnown RBP7.47□□□□□ -1.21
COL11A1-208ENST00000470170 FAM189BP81408 668 aa7.47□□□□□ -1.21
COL11A1-208ENST00000470170 PURAQ00577 322 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms